Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1924 ATGCTAGGTGAACATCTATATCCCCTTGTAGAGCGTCTTGCGCCGACCCATACCGCAAAGGTAACGGGGATGTTGCTGGAAATGGACCAATCCGAGGTCATCCATCTCATCGAATCTCCCGAGGACTTGAAGATAAAGGTGTCAGAGGCAATGCAAGTCCTTCACGAAGCTGCATCGAGTTCTGAAGTTGGTGATCAGCTCGGCTCATTGTCATTGAATGAATGA 225 0.4889 MLGEHLYPLVERLAPTHTAKVTGMLLEMDQSEVIHLIESPEDLKIKVSEAMQVLHEAASSSEVGDQLGSLSLNE 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1924 74 Gene3D - 1 59 - -
Sto10g1924 74 PANTHER POLYADENYLATE-BINDING PROTEIN 1 63 - -
Sto10g1924 74 Pfam Poly-adenylate binding protein, unique domain 1 54 IPR002004 GO:0003723
Sto10g1924 74 SMART poly_2 1 57 IPR002004 GO:0003723
Sto10g1924 74 PANTHER RNA BINDING PROTEIN 1 63 - -
Sto10g1924 74 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 1 59 IPR002004 GO:0003723
Sto10g1924 74 SUPERFAMILY PABC (PABP) domain 1 62 IPR036053 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1924 Sto-Chr10 29013465 29013689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1924 1 74 Eukaryotic Initiation Factors Gene Family AT1G49760 65.789 7.23e-25 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1924 K13126 - gmx:100783163 120.553