Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1736 atggcgGAATCGGAGACTGGCACGCCGACGGCCGCGTCGGCGCCGACGACGCCGGGGACGCCGGCGCCGCTATTCACGTCGCTGCGAGTGGACTCTCTGTCTTATGAACGGAATTCAATGCCGAGGTGCAAGTGTTTGCCCACAAAGGGCCATTCCTGTTTCACTGATTTCACTGTTCCCAATGTGTCCCTCACGCGCAAGATTGGAGCAGAGTTTGTGGGGACGTTCCTATTGATGTTCGCAGCATCGGCAGGACCCATCCTTAACCAGAAATACAACGGAGCAGAATCTTTGATTGGGAATGCGTCGTGTGCGGGTTTAGGCGTGATGATCGTAATTCTATCTACGGGCCATATCTCTGGGGCCCACTTGAACCCATCTCTCACCATTGCTTTCGCCACGTTTCGCCACTTTCCTTGGGCCCACGTGCCGGCCTACGTAGCTGCTCAAGTCTCCGCTTCTATTTGTGCCTCTTATGCTCTGAAAGGCATATTTCATCCTTACCTGTCTGGTGGTGTCACTATCCCTTCTCCCACTACTACTGTTGCCCAAGCCTTTGCACTTGAGTTCATTATCACGTTTAATCTCCTCTTTGTTGTCACTGCTGTTGCCACTGATACACGTGCGGTGGGAGAGTTGGCTGGTATTGCAGTTGGAGCTACAGTTTTGCTCAATATTCTCATATCAGGACCGGCAAGTGGCGGTTCAATGAACCCTGTTCGAACCTTGGGTCCAGCTGTTGCTGCAGGAAATTACAAGGATCTGTGGATATATATGGTGGCTCCCACTCTTGGTGCTTTGGCAGGTGCTGGTATTTACACTCTAGTCAAGCTTCGCGACCATGAGGCTGAACCGCCAAGACAAGTTAGGAGCTTTCGTCGCTAG 885 0.5198 MAESETGTPTAASAPTTPGTPAPLFTSLRVDSLSYERNSMPRCKCLPTKGHSCFTDFTVPNVSLTRKIGAEFVGTFLLMFAASAGPILNQKYNGAESLIGNASCAGLGVMIVILSTGHISGAHLNPSLTIAFATFRHFPWAHVPAYVAAQVSASICASYALKGIFHPYLSGGVTIPSPTTTVAQAFALEFIITFNLLFVVTAVATDTRAVGELAGIAVGATVLLNILISGPASGGSMNPVRTLGPAVAAGNYKDLWIYMVAPTLGALAGAGIYTLVKLRDHEAEPPRQVRSFRR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1736 294 CDD MIP 66 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g1736 294 SUPERFAMILY Aquaporin-like 62 287 IPR023271 -
Sto10g1736 294 Gene3D Glycerol uptake facilitator protein. 48 289 IPR023271 -
Sto10g1736 294 PANTHER AQUAPORIN NIP2-1 10 292 IPR034294 -
Sto10g1736 294 Pfam Major intrinsic protein 61 273 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g1736 294 PRINTS Major intrinsic protein family signature 66 85 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g1736 294 PRINTS Major intrinsic protein family signature 105 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g1736 294 PRINTS Major intrinsic protein family signature 142 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g1736 294 PRINTS Major intrinsic protein family signature 188 206 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g1736 294 PRINTS Major intrinsic protein family signature 219 241 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g1736 294 PRINTS Major intrinsic protein family signature 256 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
Sto10g1736 294 ProSitePatterns MIP family signature. 123 131 IPR022357 -
Sto10g1736 294 PANTHER AQUAPORIN NIP5-1-RELATED 10 292 - -
Sto10g1736 294 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1736 Sto-Chr10 26713216 26726828 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1736 24 294 Major Intrinsic Protein MIP AT4G10380 75.180 2.97e-154 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1736 K09874 - gmx:100804356 464.536