Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1641 ATGAATGAGATTCGACGCTTTTGTCCAGTTTTGTGTGCTGTTAAGTTTCTTGGCAATCCTGATGAAAGGAAATTTTTAGTTCTTACAAAACTTTTGATGAGTGGTTTCAAATCTGTCTTGTTATCAACTAGGGCTGGAGGTCTTGGCATTAATCTTGCTACTGCCGATGTTGTCATTCTATATGACAATGATTGGAACCCGCAAGTTGACTTGCAGGCTCAGGACCGTGCTCATAGGATTGGTCAAAAGAAGGAAGTCTAA 261 0.4023 MNEIRRFCPVLCAVKFLGNPDERKFLVLTKLLMSGFKSVLLSTRAGGLGINLATADVVILYDNDWNPQVDLQAQDRAHRIGQKKEV 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1641 86 PANTHER ISWI CHROMATIN-REMODELING COMPLEX ATPASE CHR17 39 86 - -
Sto10g1641 86 PANTHER ISWI CHROMATIN-REMODELING COMPLEX ATPASE CHR17 1 34 - -
Sto10g1641 86 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 86 IPR027417 -
Sto10g1641 86 PANTHER SNF2/RAD54 HELICASE FAMILY 39 86 - -
Sto10g1641 86 PANTHER SNF2/RAD54 HELICASE FAMILY 1 34 - -
Sto10g1641 86 CDD SF2_C_SNF 39 86 - -
Sto10g1641 86 Gene3D - 21 86 IPR027417 -
Sto10g1641 86 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 86 IPR001650 -
Sto10g1641 86 SMART helicmild6 2 81 IPR001650 -
Sto10g1641 86 Pfam Helicase conserved C-terminal domain 35 81 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1641 Sto-Chr10 25052215 25052983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1641 17 86 RAD5 or RAD16-like Gene Family AT5G05130 45.714 9.86e-13 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1641 K11654 - mus:103978974 95.9005