Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1577 ATGATTGATATAGCATCATCATTGGAATATCTTCATCATGGCTCTTCTACACCAATAGTTCATTGTGACGTAAATCCAAGCAATGCTTTGTTGGACGAAGATATGGTAGGTCATGTTAGTGATTTTGGTATTTCCAAACTATTGGGTGAAGAGAAATTGCAAATTTATACCAAGACTTTTGCTACAGTTGGCTATATGGCGCCAGAGTATGGATCCAAAGGAATTGTTTCTATTAAAGGAGATGTATATCGTTATGGTATCATGCTTATGGAAGTGTTTACAAGGAAGAAGCCAATAGATGATATGTTTGTTAAAGGGAGACCATCAAATTGGTAA 336 0.3571 MIDIASSLEYLHHGSSTPIVHCDVNPSNALLDEDMVGHVSDFGISKLLGEEKLQIYTKTFATVGYMAPEYGSKGIVSIKGDVYRYGIMLMEVFTRKKPIDDMFVKGRPSNW 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1577 111 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 1 103 - -
Sto10g1577 111 PANTHER RECEPTOR-LIKE PROTEIN 55 1 103 - -
Sto10g1577 111 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Sto10g1577 111 SUPERFAMILY Protein kinase-like (PK-like) 1 103 IPR011009 -
Sto10g1577 111 ProSiteProfiles Protein kinase domain profile. 1 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g1577 111 Pfam Protein kinase domain 2 100 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1577 Sto-Chr10 23559315 23559957 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1577 2 103 Receptor kinase-like Gene Family AT5G20480 50.000 3.53e-33 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Sto10g1577 Pkinase 3.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1577 - K13420 mtr:MTR_8g469860 173.326