Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1512 CTGGGAGTTGAGAAACTGAGCAAAGATGGCATTCAAAAGCTACAATGGGAGATTTTGGAGGCCAAAATTGGAAACTGGATTCATTTCATGCGTATAGCTGTCAAATTGTTGTTTGCTGGTGAGCAAAAAGTTTGTGATCAAATACTTGAAGGATTTGATTCACTTAGTGATCAGCGTTTGGCTGAGTTAGGCAAAGATCTATGCTATATTTCGCAATTGGCATTACACAAGGAAAATGCATATCTCAATGATGATTTAATCTATTATCAACGCTTACACATGAAATTTTGCAGATTGAAACACTGTTCAAAAGGTAAATCTTGCAATGAAATTAGAGAAGTTGCATTGGGTTTGACAAAACGGCTTGCACAAACAGCCCAGGAGACATTTCGAGATTTTGAAGAAGCAGATGAGAAAGATGCTAGAAAAACTGTTGTAGCAGATGGAGACTTTGATCTGGGTCAGGACTTATTTGAGGAGGATCAGAAGGTTGTTGAGGCTGCAAAGCAGAATCTATTATTAGAGGACCTAGAACAGATACTTAAATGCCTCTCTATTCAGGGCCTTACCTCATCAGGTGGTGGCAGTGGTACTGCAGGTGGTGATGGAGGAACTAGTAGTGGTGCTTCTAGAGCAATCGTTAAAGACAAGTTCAAGACCTTCAATATTATGTTTGAGGAAATTCACCAAAAACAATGTCATTGGACAGTTCCTAACACAGAGTTGCGAGAGTCTCTTAGGCTCACCGTTGCTGAAGTCTTGTTGCCTGACTATCGATCATTCGTGAAACGCTTTGGGCCTCTAGTAGAGAATGTGAAGAATTCCCATAAATTCATCAAATATACAACAGAAGATCTTGAGAGAATGCTGGGAGAATTTTTTGAAGGAAAAAGCATAAATGAAACGAAGCGGTAA 915 0.3956 LGVEKLSKDGIQKLQWEILEAKIGNWIHFMRIAVKLLFAGEQKVCDQILEGFDSLSDQRLAELGKDLCYISQLALHKENAYLNDDLIYYQRLHMKFCRLKHCSKGKSCNEIREVALGLTKRLAQTAQETFRDFEEADEKDARKTVVADGDFDLGQDLFEEDQKVVEAAKQNLLLEDLEQILKCLSIQGLTSSGGGSGTAGGDGGTSSGASRAIVKDKFKTFNIMFEEIHQKQCHWTVPNTELRESLRLTVAEVLLPDYRSFVKRFGPLVENVKNSHKFIKYTTEDLERMLGEFFEGKSINETKR 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1512 304 SUPERFAMILY Cullin repeat-like 1 295 IPR016159 -
Sto10g1512 304 Pfam Exo70 exocyst complex subunit 153 291 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto10g1512 304 Pfam Exo70 exocyst complex subunit 25 149 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto10g1512 304 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 156 299 - -
Sto10g1512 304 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 1 150 - -
Sto10g1512 304 PANTHER EXOCYST COMPLEX PROTEIN EXO70 156 299 IPR004140 GO:0000145|GO:0006887
Sto10g1512 304 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 150 IPR004140 GO:0000145|GO:0006887
Sto10g1512 304 Gene3D Exocyst complex component Exo70 152 304 - -
Sto10g1512 304 Gene3D Exocyst complex component Exo70 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1512 Sto-Chr10 21694979 21704690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1512 153 304 EXO70 exocyst subunit family AT5G03540 57.895 9.67e-44 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1512 K07195 - gmx:100813987 180.644