Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1494 ATGCTGAAATCGGAAGTCAGCGAAAAGACTGCAGTTCCTAATGTAAATTCTGTCAGAGGTTTTAACGTTATCGATCAAGCCAAGGCCGAGGTTGAAAAGATATGCCCTGGAGTTGTCTCATGTAGCTGTTGCAGTAAGAGATGCATCATTTTTTTAGATTCCACTTCAGCATACAAGCAAATAGCAAATAGTGATATTCCAAGTTTCATAGATAGTCTTGAAGTACTTATCTCTCGTTCCAACACTAAAGGACTTAGTCCAAGAGACATGGTAGCTTTATCtgGTTCTCACACAATAGGACAAGCCCAATGCTTCACAATTTGTGATAgaatatataacaataatagCAGTAATATAGATGTTGGATTTGCTACCAAATGTCAAGGATCCTGTCGATTGGCAAGTAGCCCTAATAACGACCAGAAGCTGGCTCCTCTTGACTTGGTAACGCCTAACTCATTTGACAACAATTACTTCAAGAACTTGATTCAAAAGAATTGA 501 0.3772 MLKSEVSEKTAVPNVNSVRGFNVIDQAKAEVEKICPGVVSCSCCSKRCIIFLDSTSAYKQIANSDIPSFIDSLEVLISRSNTKGLSPRDMVALSGSHTIGQAQCFTICDRIYNNNSSNIDVGFATKCQGSCRLASSPNNDQKLAPLDLVTPNSFDNNYFKNLIQKN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1494 166 Gene3D - 1 46 - -
Sto10g1494 166 PRINTS Haem peroxidase superfamily signature 89 104 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g1494 166 PRINTS Haem peroxidase superfamily signature 147 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g1494 166 ProSitePatterns Peroxidases proximal heme-ligand signature. 89 99 IPR019793 -
Sto10g1494 166 Pfam Peroxidase 53 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g1494 166 Gene3D Peroxidase, domain 2 67 166 - -
Sto10g1494 166 PRINTS Plant peroxidase signature 19 32 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g1494 166 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g1494 166 SUPERFAMILY Heme-dependent peroxidases 6 165 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sto10g1494 166 ProSiteProfiles Plant heme peroxidase family profile. 1 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g1494 166 PANTHER PEROXIDASE 72-RELATED 6 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g1494 166 PANTHER PEROXIDASE 6 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1494 Sto-Chr10 20928062 20929575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1494 7 165 Peroxidase AT1G14550 50.568 2.75e-51 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1494 K00430 - gmx:100818538 192.971