Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1441 ATGAAAGGATGCCTGAATGATGACAAGGCCACAGAAGCAACTATTGATGCAGAGGATTATCTTCATACTGGTGATATTGGCTACATAGATGCCGACGATGAGATTttcatagttgacatagttaaggaACTGAACTCATCAAATTCAAAGGCTTTTAGCCAAAAGAATGTTGTTGCCGGTGAAGTTCCAATTGCTTTGTGGTTAAGTCCAATGGCTTTGATCTTACCGAGGAGGCTGTAA 240 0.375 MKGCLNDDKATEATIDAEDYLHTGDIGYIDADDEIFIVDIVKELNSSNSKAFSQKNVVAGEVPIALWLSPMALILPRRL 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1441 79 Pfam AMP-binding enzyme 1 43 IPR000873 -
Sto10g1441 79 Gene3D Luciferase; Domain 3 1 39 - -
Sto10g1441 79 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 44 - -
Sto10g1441 79 SUPERFAMILY Acetyl-CoA synthetase-like 1 43 - -
Sto10g1441 79 PANTHER 4-COUMARATE--COA LIGASE 2 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1441 Sto-Chr10 16700589 16701086 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1441 1 44 Monolignol Biosynthesis Gene Families AT1G65060 70.455 9.30e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1441 K01904 - gmx:547492 77.7962