Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1413 ATGTCCAATCATCCTCTTCGTGCCCTGTTCCTGGAAAACACAATGAGTAGGATGAAAAATTGCACTACACTAAGAGCCAGTAGAAAACTTATGAACAGAAATAAGATACTTCAATGCCTCTCTATTCAGGGCCTTACCTCATTAGGTGGTGGCAGTGGTACTGCAGGTGGTGATGGAGGAACTAGTAGTGGTGCTTCTAGAGCAATCGTTAAAGATAGGTTCAAGACCTTCAATATTATGTTTGAGGAACTTCACCAAAAACAATCTCAGTGGACAGTTCCTGACACAGAGTTGCGAGAGTCTCTTAGGCTCGCCGTTGCTGAAGTCTTGTTGCCTGCCTATCAATCATTCATGAAACGCTTTGGgtatgttttcttttctttaacaaGTACATGCACAATAGGTCATGCATCTAATCATCTATAA 426 0.4038 MSNHPLRALFLENTMSRMKNCTTLRASRKLMNRNKILQCLSIQGLTSLGGGSGTAGGDGGTSSGASRAIVKDRFKTFNIMFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYQSFMKRFGYVFFSLTSTCTIGHASNHL 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1413 141 Pfam Exo70 exocyst complex subunit 34 124 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto10g1413 141 Gene3D Exocyst complex component Exo70 3 132 - -
Sto10g1413 141 SUPERFAMILY Cullin repeat-like 4 122 IPR016159 -
Sto10g1413 141 PANTHER EXOCYST COMPLEX PROTEIN EXO70 32 124 IPR004140 GO:0000145|GO:0006887
Sto10g1413 141 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 32 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1413 Sto-Chr10 15448013 15451819 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1413 35 122 EXO70 exocyst subunit family AT5G52340 67.045 9.54e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1413 K07195 - gmx:100777735 135.961