Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1405 ATGGTTGAACAATCCTATGATCCTACACTGATCCACATGACTTCCATGCAACTCTTCCAAGAATTTGCCAACGAAGATGATACTTCGCAGCTAGCATCTGTAACAATGCAGATAATGCAAACTATTCAAACCAATTTAGGTGGAAAATCAAAGCAGTATAAAGACCCTGCTTTGATACATCTATTTCTCATGAATAATATTCATTATATTGTTCGATCAGTATGGAGGTATGAAGCAAAGGATTTGTTAGGGGACGATTGGGTACAACGACATCGGAGGATTGTGCAGCAGCATACAAATCAGTACAAAAGGAATGCATGGGCAAAGATACTTCAATGCCTCTCTATTCAGGGCCTTACCTCATCAGGTGGTGGCAGTGGTACTGTAAGTGGTGATGGAGGAACTAGTAGTGGTGCTTCTAGAGCAATCGTTAAAGACAGGTTCAAGACCTTCAATATTATGTTTGAGGAACTTCACCAAAAACAATATTAG 492 0.3984 MVEQSYDPTLIHMTSMQLFQEFANEDDTSQLASVTMQIMQTIQTNLGGKSKQYKDPALIHLFLMNNIHYIVRSVWRYEAKDLLGDDWVQRHRRIVQQHTNQYKRNAWAKILQCLSIQGLTSSGGGSGTVSGDGGTSSGASRAIVKDRFKTFNIMFEELHQKQY 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1405 163 Pfam Exo70 exocyst complex subunit 20 162 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto10g1405 163 Gene3D Exocyst complex component Exo70 4 163 - -
Sto10g1405 163 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 14 162 - -
Sto10g1405 163 SUPERFAMILY Cullin repeat-like 17 162 IPR016159 -
Sto10g1405 163 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 162 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1405 Sto-Chr10 15330870 15337077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1405 14 162 EXO70 exocyst subunit family AT5G03540 72.667 9.25e-61 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1405 K07195 - gmx:100777735 226.868