Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1229 ATGCTCAAGTCCCTCAGGGAGCCTCTAGTTGGGGATATTGAACTCTATAAGGTGATTGATCCCTCAAGGAGTACTGGAAGTTTTTCTGCAGTTGCTGGTTCTGTTGGCTATATTCCTCCAGAGTATGCATACACAATGAGAGTAACAATGGCTGGGAATGTGTACAGCTTTGGGGTAATTCTGCTGGAATTGCTGACAGGAAAAGATGCGGTGACTAATGGAACTGAATTGGTGAAGTGGGTATTGCGGAACTCGGCAAAGAAAGATCACATTCTGGATTTTCATGTCAGTAGAACATCGCAGGCTGTCAGAAATCAGATGCTTGCGATTCTTAAGGTTGCTCTTGCATGTGTTAGTTCATCCCCAGAAGCAAGACCTAAGATGAAGAGTGTGCTACGGATGATCCTGAATGCAAGATAA 420 0.4429 MLKSLREPLVGDIELYKVIDPSRSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGKDAVTNGTELVKWVLRNSAKKDHILDFHVSRTSQAVRNQMLAILKVALACVSSSPEARPKMKSVLRMILNAR 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1229 139 Pfam Protein kinase domain 23 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g1229 139 SUPERFAMILY Protein kinase-like (PK-like) 8 135 IPR011009 -
Sto10g1229 139 Gene3D Transferase(Phosphotransferase) domain 1 1 137 - -
Sto10g1229 139 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 139 - -
Sto10g1229 139 ProSiteProfiles Protein kinase domain profile. 1 139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g1229 139 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 1 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1229 Sto-Chr10 12127581 12128661 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1229 1 135 Receptor kinase-like Gene Family AT2G41820 52.817 7.55e-40 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Sto10g1229 Pkinase 3.6e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1229 - - pvu:PHAVU_010G033800g 238.039