Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1216 ATGGCTCATGCTTTACAACACATCACTAGCTATATAGCCATTAATTCCAAACTCATATACACTCTTGCTCTGTTCAAATATTCAAGCAAGAACAATATGGGTTCCTTGGATAACAATACCATTCTCCCAATTAATCCTGTGATGATGAAACCTCCCACTAAGGAAGAGGATGATGAGGCATGCCTCTACGCCATGCTCTTATCTAGCTTCCAAGTTTTTCCTGCCATCCTGAACGCCGCCATTGAGCTGAACGTGTTCGAGATAATGGCCGAGAGCGGCGGGCGACGCGGCAGCGGCGGGTTCTTGTCGGTGCCCGAGATCGCGTCTCGGCTTCCGGCAAGCCACCCGGAGCTCCACGACAGGCTCGACCGGATGCTGCGCGTGCTCGCGTGTTTCAAGGTCGTGGACTGCACCACACGGGTCGTTGCCGGGGACGGCGGCGAGGTGGAGAGGGTGTATAGCTTGACTCTTGCTGGGAGTTACTTCTTGCAGAATCAAAGTGAGAGTCTGGCTGCCTTCTCTAATCTCACCTGCCATCCGGCTACGGTTAAGGTTTGGTTGAACATGAAGGAAGCAATTCTTGATGGAGGAGTGGACCTATTCAACAAAGTGCATGGAATAAGCATGTGGAAACACATGGAGAAGGAcacaaaattgaaccaaacattcAACAAGGCAATGGCAGGCATATCAGCAATCCAAATGAGGAAGTATTTGGAAGTGTATGATGGATTTGAAGGAGTCTCAACATTGGTTGATGTGGCAGGAGGAGTGGGCCAAAGTCTCAAAATGATCATCTCCAAGTACCCTAATATCAAAAAGGGTATTAACTATGACTTGCCCCAAGTCATTGAGCATGCCTCACCCTATCCAGGAATTGAGCATATTGGAGGAAATATGTATGAAAGTGTTCCAGAGGGCGATGCAATTATGGTCAAGgcaACATGTCATAATTGGTCAGATGAGAAATGTGTGGTGCTTTTGAAAAATTGTCACAAAGCAATCCCACAAAATGGGAAGGTGATTATTTTCGACATGATAATGCCTGAAGAACCAGAGTCAAGTGTTGCAGCTCAGTATGTTTCCATCACAGACAACACAATGTTCATACAAGCAGGAGGGAAAGAAAGAAGTGAGAAGCAATTTGAGAAGCTGTGTAAAGACTCTGGATTCTCCAGTTTCCGAGTTGTTTCTCGTGCTCTTTCCATTTATGGAGTCATTGAGTTTTATAagtaa 1236 0.4539 MAHALQHITSYIAINSKLIYTLALFKYSSKNNMGSLDNNTILPINPVMMKPPTKEEDDEACLYAMLLSSFQVFPAILNAAIELNVFEIMAESGGRRGSGGFLSVPEIASRLPASHPELHDRLDRMLRVLACFKVVDCTTRVVAGDGGEVERVYSLTLAGSYFLQNQSESLAAFSNLTCHPATVKVWLNMKEAILDGGVDLFNKVHGISMWKHMEKDTKLNQTFNKAMAGISAIQMRKYLEVYDGFEGVSTLVDVAGGVGQSLKMIISKYPNIKKGINYDLPQVIEHASPYPGIEHIGGNMYESVPEGDAIMVKATCHNWSDEKCVVLLKNCHKAIPQNGKVIIFDMIMPEEPESSVAAQYVSITDNTMFIQAGGKERSEKQFEKLCKDSGFSSFRVVSRALSIYGVIEFYK 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1216 411 PANTHER O-METHYLTRANSFERASE 49 411 IPR016461 GO:0008168
Sto10g1216 411 Gene3D Vaccinia Virus protein VP39 163 411 IPR029063 -
Sto10g1216 411 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 49 411 - -
Sto10g1216 411 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 169 409 IPR029063 -
Sto10g1216 411 Pfam Dimerisation domain 76 130 IPR012967 GO:0046983
Sto10g1216 411 PIRSF O-mtase 45 411 IPR016461 GO:0008168
Sto10g1216 411 Gene3D - 46 162 IPR036388 -
Sto10g1216 411 SUPERFAMILY "Winged helix" DNA-binding domain 55 166 IPR036390 -
Sto10g1216 411 Pfam O-methyltransferase domain 186 392 IPR001077 GO:0008171
Sto10g1216 411 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 65 411 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1216 Sto-Chr10 11922081 11929044 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1216 52 411 Monolignol Biosynthesis Gene Families AT5G54160 46.961 1.48e-112 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1216 - - qsu:112031144 419.083