Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1163 ATGGTTGTGGCTTTTACGGTTCCTCAGAAACTTACAATCTTTGCTCAAAAATGTTACAAAGATAACATTCTTACACTCGCAAAATCATCGATAGAGGATATCACTGAATTAACTTCATCACTATCACTAACTGATGATCAAGATACGATCGCAAGTGAAACTAGTGAAATCGAGAACTCTGAGACTGCTCAACAAtcggagaagaagaaaagtaatAGGTGCAAGAGTTGCAATAAAAAGGTGGGGCTCACAGGGTTTCAGTGTCGATGTGGGGACTTGTTTTGTGGAAACATAGATACCCAGAAGAGCATTCTTGCACTTGAAGTTTACAAGGCTATAGATAAAGAAACTGGTGAATTTGTTGCCCTCAAGAAACTTCGGTTTCAGTTCAATTTTAATTCACAAaggaagTTGGAGAATCACCTTGCTACTGCTAAAACTGAAGTCAGAATTGTAAAGAAATTGAATCATGAGAATGTGATCAAGCTCAAAGCACTTATTTTCCAAAGCACTCAGACAGAAACTGaagtcttaattttttttgtttccttgACTTTAGCATGGATAAATCTTGGATTACCAAGCCACGAAACACACTTGAATATGCAATTGGTTTCATGCATTTTCATGGGctgcagTCGTGCATCAGATTATGGGTTGATGAAAGTTGATAACTCAGGATGGATTACAGAGTTTACAGAAAAACCAAAGGGACCAGGTCTGAAGGCAAtgTCCTTCTTTGATGCCAATCTGGCCCTAACAGATGGAACAGGTTTTGTTTTAAAGTTGAGTGATATTTCTCTAAATGCGCCTCTGTAG 819 0.3565 MVVAFTVPQKLTIFAQKCYKDNILTLAKSSIEDITELTSSLSLTDDQDTIASETSEIENSETAQQSEKKKSNRCKSCNKKVGLTGFQCRCGDLFCGNIDTQKSILALEVYKAIDKETGEFVALKKLRFQFNFNSQRKLENHLATAKTEVRIVKKLNHENVIKLKALIFQSTQTETEVLIFFVSLTLAWINLGLPSHETHLNMQLVSCIFMGCSRASDYGLMKVDNSGWITEFTEKPKGPGLKAMSFFDANLALTDGTGFVLKLSDISLNAPL 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1163 272 Gene3D - 48 101 IPR035896 -
Sto10g1163 272 Gene3D Phosphorylase Kinase; domain 1 108 182 - -
Sto10g1163 272 PANTHER AN1-TYPE ZINC FINGER PROTEIN 14 97 - -
Sto10g1163 272 SUPERFAMILY Protein kinase-like (PK-like) 108 182 IPR011009 -
Sto10g1163 272 SUPERFAMILY AN1-like Zinc finger 55 96 IPR035896 -
Sto10g1163 272 Pfam Nucleotidyl transferase 196 241 IPR005835 GO:0009058|GO:0016779
Sto10g1163 272 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 14 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1163 Sto-Chr10 11341487 11347063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1163 62 96 C2H2 Transcription Factor Family AT3G52800 57.143 3.56e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sto10g1163 NTP_transferase 2.6e-06 CL0110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1163 - K24687 mnt:21384765 70.0922