Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1162 ATGGATCCCAAATTATGTGCGAATGGTTGTGGCTTTTACGGTTCCTCTGAAACCTACAATCTTTGCTCAAATTGTTACAAAGATCACATTCTTACACTCGCAAAATCATCGGTAAAGGATATCATTGAATTAACTTCATCACTATCACTAACTGATTATCAAGATACGGCCGCAAGTGAAACTAGTGAAATCAAGAACTCTGAGATTGCTCAACAATCGGAGAATAAGAGTAGTATAGATACGCAGAAGAGCATTCTTGCACGGTAG 267 0.382 MDPKLCANGCGFYGSSETYNLCSNCYKDHILTLAKSSVKDIIELTSSLSLTDYQDTAASETSEIKNSEIAQQSENKSSIDTQKSILAR 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1162 88 Gene3D - 1 84 - -
Sto10g1162 88 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Sto10g1162 88 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Sto10g1162 88 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Sto10g1162 88 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 9 3 75 - -
Sto10g1162 88 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 75 - -
Sto10g1162 88 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 50 - -
Sto10g1162 88 MobiDBLite consensus disorder prediction 61 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1162 Sto-Chr10 11337175 11337518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1162 4 31 C2H2 Transcription Factor Family AT3G52800 67.857 1.41e-07 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1162 - K24687 bvg:104885372 63.5438