Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1161 ATGGATCCCAAATTATGTGGGAATGGTTGTGGCTTTTATGGTTCCTCTGAAACCTACAATCTTTGCTCAAAATGTTACAAAGATCAGATTCTTACACTCGAAAAATCATCGGTAGAGGATATCACTGAATTAACTTCATCACTATCACTAACTGATGATCAAGATATAGCCGCTAGTAAAACTAGTGAAATCAAGAACTCTAAGACTGCTCAACaatcagagaagaagaagagtaataGGTGCAAGAGTTGCAATAAAAAGGTGGGGCTTACAGGGTTTCAGTGTCGATGTGGGGACTTGTTTTGTGGAAAACATAGATACCCAGAAGAGCATTCTTGCACTGTAAATTTCAAGCAGATTGGTCGTGAAATTTTGATCCAACAAAATCCTCTCATAAAGGCTGATAATGAATTGAACAAAATAGTTTCTTAA 432 0.3519 MDPKLCGNGCGFYGSSETYNLCSKCYKDQILTLEKSSVEDITELTSSLSLTDDQDIAASKTSEIKNSKTAQQSEKKKSNRCKSCNKKVGLTGFQCRCGDLFCGKHRYPEEHSCTVNFKQIGREILIQQNPLIKADNELNKIVS 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1161 143 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
Sto10g1161 143 SUPERFAMILY AN1-like Zinc finger 62 135 IPR035896 -
Sto10g1161 143 Pfam AN1-like Zinc finger 81 114 IPR000058 GO:0008270
Sto10g1161 143 Gene3D - 55 136 IPR035896 -
Sto10g1161 143 SMART AN1_Zf_4 81 118 IPR000058 GO:0008270
Sto10g1161 143 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 50 - -
Sto10g1161 143 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Sto10g1161 143 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 3 137 - -
Sto10g1161 143 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Sto10g1161 143 ProSiteProfiles Zinc finger AN1-type profile. 75 121 IPR000058 GO:0008270
Sto10g1161 143 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1161 Sto-Chr10 11332642 11333301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1161 4 141 C2H2 Transcription Factor Family AT3G52800 37.975 2.10e-32 111