Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1157 ATGGATGCTAGTGCCTTAGCAGTGAATGTTACTGAACAAACTAAGAATGGAAGTAAtaatagtggtagtggtaaGAAGAAAGAATACGTAAAAAAGGCAGATAGATACTGTAATTTTTGCAGAAAAGCTGGTCATATGGAGGATGCGTGTTTTAAGAAACACGGATATCCTGATTGGTTCCAAGAGTACAAGAATAAGAAGCCACAAAATCCTGTGTTAGCAATGAGTGGTGGTGAATCTGATTCCAAGTCTCAAAATCTAGAGTCATCGCAGTTTTCTCAGATGATTCAGATGGAGATTAAGAAGTACTTAAAGAAAAGAGTTCTACTGAAGAAAGTCCTGTCAATGCTACGTACTTTGCTGACTTTGCAGGACCGATTGAATAAAGAGGTTGTGGCTGAAGGAAAATTGGAGAAGAACTTGTATGTTCTTAACAAAAGTTGTAATGTCAAATCGGAGTCTGTTGTTTTACATAATGTGGATAGGTGTAATAATTCACAGCTTAGTGATAAACACTCTGTAGTTGATTTACAAGACAATACTGATCGATCAATTCCTCCTGTGTTTGTGGATGAAGATGATTCTGAGCTTGTGGTTGAGGTACCTGTTAAGGGAACTAATAACACATCTTCTACTAGTGTTATCATTCCCGTGGAGGGTACATCTAATGTTTCTGGTGGTGAAAGTTCTTCAGTGCCTTGTATTAGTTCCTCAACTTCTGATGTTGCTCCAATTTCTGATGCACAATCTTCTGTTGAGACAGCCGAGAAGGGCTCGTGTAATGATGTTTCAGGTGTTCAGATTGGGCCAGGAACTGGATTGGAAGCTGGGAGTAAGGTTGGAGAGAAAAATGACCACACTCCAGCTATTTTGCTATCTGATGAGCTGGCCGAGCCAAGCACTGAGATGACAAATTCTAACCCTTCTATATCCTCTCATTTTATTAATCCTTCTCAAGCTTTTGAGCATTTAGTTGATTTTGCTTCTACTTGTGACGCAGGAAAGAGTGTGAGCTGTGAGCATGTTGGTCCGGTGGCTAAGCTAGATCAGCACGAGCTTGATCCCATTCTTGGGAAGgtGGGTCTTCCCGCCGAGGCAAACGCGAACCATCGGATTAATGGTGAATGGACCATTCATTCGTTAGTTCGAAACTCAAAGACTAGAGGAGAAGCTGTGGCCTCCGGGGGATTAGCTTCATCGATGGCTTCGGCAAATGAATCCATTCCAACTCCATCTGACGCTTCATCTTCTCTTTTCCTACCAACAGTTACTTACTCCTTTTTCGCTACCATTTCCGTCTGCTTGGACAGTTGGTGGTTGGTTAAAGCCGAAAAGGATTTCGACGGAAAGCTATTAGCCGTTGCAGGGTTCACCTCAAGAGAGCGAGGCGCAAAGCGGGTGTTTGTTTCTGCACCAATAATCAAAAGACATGATCTAACTACGTTAGAGACAGCAGATGggatttatcttattattttaggTTTCATCAATGAGCTTCGTACTAAGGAAAATGGATTTCCTTCTGAGGTTTTCAATCGCTTTCTATTTGGGTTTCCTCCTGACTGGGACTCTTATGCTGCTAATTGCTTTAAACAAGTTACCACTGGCATTGATTCAGTAAGTATTCCTATTTCTAATGGAGAGGAAGCGAAGAGTCCAGTTACACCCATTCAATCACAGGGGGAAGTAAATGAGTTATCAGAACAATTTCTTGTAGATTCTGCATCCCGAAAATCTAGTACACTGTCAGCAAATACTGAAAGCCAATCTAATACAAAGAAAAGGTTGTTAGCTAGACCAAGAATGACCAAGCCTGAAAGAAATACGACAAAGTCTGTTTCATCTGATCCtaaaagaaaattgatgaagtctacatcagctgatcctaaaagaaaaatgactaagTCTATATCATCTGGTCATAAAGAGAGAAAGACTAAGTCTATTTCAGCTGACCCTGCAGATGAAAGCTTATCTGTTAGGAGATGCAACAATAATTTTGAAACACCTGAGAAGTTATCCAGAGTTTCTTCAGATTCAATGAATTTCAAGAGATCCAGATCAGGTAGGCCGCTTCTTCCTCCCTTGGAGTTCTGGCGTAATCAGATGCCAGTTTATGATGCGGACATGTTTTCTCCATTGGATGGGATAAAGGGGGTGACTGAAGCAGCTCTTGGACGTTCATGCTTTCAAGAATCCGCAGGCATCGCTGTATCTGTAATTATGTATTGTGGAACAAGATCGGATGTAAAATAG 2256 0.3976 MDASALAVNVTEQTKNGSNNSGSGKKKEYVKKADRYCNFCRKAGHMEDACFKKHGYPDWFQEYKNKKPQNPVLAMSGGESDSKSQNLESSQFSQMIQMEIKKYLKKRVLLKKVLSMLRTLLTLQDRLNKEVVAEGKLEKNLYVLNKSCNVKSESVVLHNVDRCNNSQLSDKHSVVDLQDNTDRSIPPVFVDEDDSELVVEVPVKGTNNTSSTSVIIPVEGTSNVSGGESSSVPCISSSTSDVAPISDAQSSVETAEKGSCNDVSGVQIGPGTGLEAGSKVGEKNDHTPAILLSDELAEPSTEMTNSNPSISSHFINPSQAFEHLVDFASTCDAGKSVSCEHVGPVAKLDQHELDPILGKVGLPAEANANHRINGEWTIHSLVRNSKTRGEAVASGGLASSMASANESIPTPSDASSSLFLPTVTYSFFATISVCLDSWWLVKAEKDFDGKLLAVAGFTSRERGAKRVFVSAPIIKRHDLTTLETADGIYLIILGFINELRTKENGFPSEVFNRFLFGFPPDWDSYAANCFKQVTTGIDSVSIPISNGEEAKSPVTPIQSQGEVNELSEQFLVDSASRKSSTLSANTESQSNTKKRLLARPRMTKPERNTTKSVSSDPKRKLMKSTSADPKRKMTKSISSGHKERKTKSISADPADESLSVRRCNNNFETPEKLSRVSSDSMNFKRSRSGRPLLPPLEFWRNQMPVYDADMFSPLDGIKGVTEAALGRSCFQESAGIAVSVIMYCGTRSDVK 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1157 751 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 575 730 - -
Sto10g1157 751 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 417 560 - -
Sto10g1157 751 Pfam SANTA (SANT Associated) 433 525 IPR015216 -
Sto10g1157 751 MobiDBLite consensus disorder prediction 575 596 - -
Sto10g1157 751 MobiDBLite consensus disorder prediction 217 261 - -
Sto10g1157 751 MobiDBLite consensus disorder prediction 1 26 - -
Sto10g1157 751 MobiDBLite consensus disorder prediction 575 656 - -
Sto10g1157 751 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 417 560 - -
Sto10g1157 751 PANTHER KINETOCHORE-ASSOCIATED PROTEIN KNL-2 HOMOLOG 575 730 - -
Sto10g1157 751 MobiDBLite consensus disorder prediction 599 651 - -
Sto10g1157 751 MobiDBLite consensus disorder prediction 217 284 - -
Sto10g1157 751 MobiDBLite consensus disorder prediction 7 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1157 Sto-Chr10 11282990 11306143 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sto10g1157 SANTA 5.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1157 - - hbr:110666082 197.208