Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1148 ATGGATCCCAAATTATGTGCGAATGGTTGTGGCTTTTTCGGTTCCTCTGAAACCTACAATCTTTGCTCAAAATGTTACAAAGATCACATTCTTACACTTGCAAAATCATCGATAGAGGATATCACTGAATTAACTTCATCACTATCACTAACTGATGATCAAGATGCAGCCGCAAGTAAAACTAGTGAAATCAAGAACTCTGAGACTAGTCAACaatcagagaagaagaagagtaCTCAACAATCGGAGAAGAAGAGTAATAGGTGCAAGAGTTGCAATAAAAAGGTGGGGCTCACAGGGTTTCAATGTCGATGTGGGGACTTGTTTTGTGGAAGACATAGGTTTCCAAAAGAGCATTCTTGCACTGTAAATTTCAAGCAGATTGGTCGTGAAATTttgatcaaacaaaatcctgTCATAAAGGCTGATAAGTTAGATAAGATATTGTAG 450 0.3489 MDPKLCANGCGFFGSSETYNLCSKCYKDHILTLAKSSIEDITELTSSLSLTDDQDAAASKTSEIKNSETSQQSEKKKSTQQSEKKSNRCKSCNKKVGLTGFQCRCGDLFCGRHRFPKEHSCTVNFKQIGREILIKQNPVIKADKLDKIL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1148 149 Pfam AN1-like Zinc finger 89 122 IPR000058 GO:0008270
Sto10g1148 149 SMART A20_3 3 27 IPR002653 GO:0003677|GO:0008270
Sto10g1148 149 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 4 3 148 - -
Sto10g1148 149 MobiDBLite consensus disorder prediction 59 90 - -
Sto10g1148 149 SUPERFAMILY AN1-like Zinc finger 69 143 IPR035896 -
Sto10g1148 149 Gene3D - 58 144 IPR035896 -
Sto10g1148 149 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 5 49 - -
Sto10g1148 149 PANTHER AN1-TYPE ZINC FINGER PROTEIN 3 148 - -
Sto10g1148 149 SMART AN1_Zf_4 89 126 IPR000058 GO:0008270
Sto10g1148 149 MobiDBLite consensus disorder prediction 69 90 - -
Sto10g1148 149 ProSiteProfiles Zinc finger AN1-type profile. 83 129 IPR000058 GO:0008270
Sto10g1148 149 Pfam A20-like zinc finger 5 27 IPR002653 GO:0003677|GO:0008270
Sto10g1148 149 ProSiteProfiles Zinc finger A20-type profile. 1 34 IPR002653 GO:0003677|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1148 Sto-Chr10 11163214 11188525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1148 4 148 C2H2 Transcription Factor Family AT3G52800 42.038 7.51e-35 117