Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1133 ATGGATTTCCTGGAAGGTATGATCAAGCACCGAGACTTTAACTTGATCTTCATTCCAGAGGAGCCGCATACCACCGGCATAGCCCATCGGATTTACCATAAAGTGATTGTTATATCCCAAGCCATTGATGACTTCATTTGCCTTATCTCCTGCCACCCGGGTTCACGTGCTGAATCCCAGACAAAAGTTGGATCGCACTTAACCTGGTACTCAAGGTTTCCGCTTTCGAGCTGCAGCAAGGTAGTGACGGAAACGTTGGCTACCCTTAAAGACCAACATCCCAGTATTGATGCTCCGCTTGGGCAGACTCCTTTTAGATGGCACTCCACTGGGTACCATGTTGCCGTCTTGTGGCTTACTGAGTTGTTCCACAAAGCTGGACGTCTGGATGTCAAGTTCTCCCTTGGCTCCCTCGAGATGATGTTTGGCGAAAGAACCAGAATTAGGGTTAGAGTTGTGAGTTCTAGCGCAATCCCTTCTTCAATATTTATCTCGGTTTCTGATGGAAGGATATCTTCCTTTGATCCCATGAAGATTTGGTTGCAATTTACTTCCTTTCCAAGTTTTTCCCTTATTTTCGCAACATTGAGATGGAGCTTAGGTTGTTCATTCTTCTTCGGCTCCTCTGTTCTAACAAGAATAGAAACCTGTTCCATGGGGTATGTCTCGAGGTTACAGTTTTGGTCAGAGTGTTGTCTTGTAGCAGCAAGTGAGCTCGAGGAGATTTTTGGTGCTCATTTGGGAATTCTTCATCTCCCTTTCACTTCTAACAAGTTTTCGATTCCTCCACCGAGTTACTTCTGTCCACTCAGATTGagAGTTGTGATTTGTTGTCTTTCTATTCATGATTTTGGAGTAGAATTTTCAGTGGTGCTAAATCTAGCTCTTTTTGAGGTTGATTCTCTTGCCAAAAGACCTTGGGAGGGAACATCAAACATTGCATCTAATGACAATTTAGATATGGATTGGAAACCGAAATTGGGGATGGAATTTGACAACGTAGAGGAAGCTTGGACATTTTGGAAAGAATATGGTGCAAAAATGGGTTTTGGAGTGAGAAAGTCATACACAAACAAGAGTAAAAAAGATGGTTCTATTATGACTGTTAGATTTCTTTGTTGCAAGGAAGGGTTGAGAGCAAAAGATAAAAGAGACCATCTAACAAAGAATCCTCGACAAGAAACCAGAACAAATTGCAAAGTTAGAATGGGAATCAcaaatgtgaatggaatattTAGAATCTATGACTTAATAGAGGATCACAATCACATTCTTCATATTCCAAAAACAACTCCTATGTTAGCCTCTAAACGTAAGATATCGAAAGTTCAAGCAAATGAGATTGAGTTGGTTGAAGATTCTAAGTTGCAACAAAGATTGTCACATGAGCtgttaaatggacatgtaggcGGAAGAGACAATCTTGGCTACACTTATTTATATCAGAATAACTATCTTCAAACCAGAAGACAAAAGAGTTTGATGTATGGGGAAGCCGGTTGTTTGCTAAGATATTTCCAAGAAGAGTTGTTAGTAAATCCGTCATTTTATCATGCTTATCAAATGGATAATGAGGAACAAATAACCAATATATTTTGGGCTGATGCCAGAATGCTCTTGGATTATGGGTATTTTGGTGATGTGATATCCTTCAACACAACATTTTGTATTAATAATGCACATAGGCCACTTGCTATATTTTCAGGATTCAATCATTTCAGAGGAGTGGTGGTATTCGGAGCTGCATTATTGTATGATGAGACAAAAACATCCTTTAAGTGGTTGTTTGAAACatttttgaaagcaaatttgCAAAAAAAGCCTCAAACCATATTCACTGATCAGGATGAAGTAATGGCTCAAGCATTGCATGAGGTTATGCCTGAAGTTTGCCATGGATTATGTACCTGGCATTTGACACAAAATGGCATCAAACACCTCGGAAACTTGATGAAACATGAAACTCACTTTTTACGAGACTTCATGACTTGCATGCATGGATATGATGAGGAGGCACAATTTGAGGCAGCTTGGAGAAGATTGCTTTTAGACTACAATGTTCAAGAAAACGCATGGATCACATCAATATACACTTTAAAGGAGAAATGGGCAGCCTGTTATATGAAGAGGGCTTTAACACTAGGAATGCAGAGCACCAAACACAGTGAAAGCTTGAATGCGGACTTCAAAAGGTGTTTGAAACCTAATATTGATATTATTCAATTCTTTAAACACTTTGAAAGGGTTGTGGAGGATAAAAGGTATAATGAATTGAAGTGTGAATTTGAGTTGCGACAAAAACTTCCAAGATTGAAATGTGCATTCTCACCCATGCTAAAACAAGTTGTGGAAGTTTACACCCCTACAATATTTGACATATTTCAAGAGCAATTTGACATGTTCCATGCTTGTTCTATAAAGCATAAGAATGAGATACAACCATGTTTTGAATATGTCATTAATGTGTTTGATCAAGAGAGTGAATTTAGAGTTTTGTTGCATCCTCTTGAGAAGGCAGTGTCTTGTAGCTGTAGAAGGTTCGAGAACTTCGGTATTTTGTGTTGCCATGCTTTGAAGGTGCTTGATGCCAATGAAATTAAGACTATTCCTGATCAGTACATTTTGAGGAGGTTTACAAAATATGCTAGAATTGGTGTTATGGAGGATGTTAAGGAAATCGAAGTTGTGGGAGATCCTAAATTAGCTCGCACAATGCGGTATAAACAACTTTGCCCCAAGCTGGTCAAGTTAGCATCTGAAGTGGCTGATTCTGAACAAGAATTCTTGTTGGTCACTAAATATGTGGAAGAATTGAGTAAGCAAGTCATGGAGCTTCGATTGAAGACAAAAGATGCGTGCAACGAGAAGAATGGCCCTACAGCACCAATTAGTGAAGACTCATCACAACCAACAGGGAATTGCTCATTATCTTTGTGGTTCCTCAAGGATTTGGGATTCAATTGA 2964 0.3866 MDFLEGMIKHRDFNLIFIPEEPHTTGIAHRIYHKVIVISQAIDDFICLISCHPGSRAESQTKVGSHLTWYSRFPLSSCSKVVTETLATLKDQHPSIDAPLGQTPFRWHSTGYHVAVLWLTELFHKAGRLDVKFSLGSLEMMFGERTRIRVRVVSSSAIPSSIFISVSDGRISSFDPMKIWLQFTSFPSFSLIFATLRWSLGCSFFFGSSVLTRIETCSMGYVSRLQFWSECCLVAASELEEIFGAHLGILHLPFTSNKFSIPPPSYFCPLRLRVVICCLSIHDFGVEFSVVLNLALFEVDSLAKRPWEGTSNIASNDNLDMDWKPKLGMEFDNVEEAWTFWKEYGAKMGFGVRKSYTNKSKKDGSIMTVRFLCCKEGLRAKDKRDHLTKNPRQETRTNCKVRMGITNVNGIFRIYDLIEDHNHILHIPKTTPMLASKRKISKVQANEIELVEDSKLQQRLSHELLNGHVGGRDNLGYTYLYQNNYLQTRRQKSLMYGEAGCLLRYFQEELLVNPSFYHAYQMDNEEQITNIFWADARMLLDYGYFGDVISFNTTFCINNAHRPLAIFSGFNHFRGVVVFGAALLYDETKTSFKWLFETFLKANLQKKPQTIFTDQDEVMAQALHEVMPEVCHGLCTWHLTQNGIKHLGNLMKHETHFLRDFMTCMHGYDEEAQFEAAWRRLLLDYNVQENAWITSIYTLKEKWAACYMKRALTLGMQSTKHSESLNADFKRCLKPNIDIIQFFKHFERVVEDKRYNELKCEFELRQKLPRLKCAFSPMLKQVVEVYTPTIFDIFQEQFDMFHACSIKHKNEIQPCFEYVINVFDQESEFRVLLHPLEKAVSCSCRRFENFGILCCHALKVLDANEIKTIPDQYILRRFTKYARIGVMEDVKEIEVVGDPKLARTMRYKQLCPKLVKLASEVADSEQEFLLVTKYVEELSKQVMELRLKTKDACNEKNGPTAPISEDSSQPTGNCSLSLWFLKDLGFN 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1133 987 ProSiteProfiles Zinc finger SWIM-type profile. 829 865 IPR007527 GO:0008270
Sto10g1133 987 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 311 947 IPR031052 GO:0006355
Sto10g1133 987 PANTHER OS03G0181600 PROTEIN 311 947 - -
Sto10g1133 987 Coils Coil 935 955 - -
Sto10g1133 987 Pfam SWIM zinc finger 839 863 IPR007527 GO:0008270
Sto10g1133 987 SMART 26again6 840 867 IPR006564 GO:0008270
Sto10g1133 987 Pfam MULE transposase domain 548 642 IPR018289 -
Sto10g1133 987 Pfam FAR1 DNA-binding domain 339 425 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1133 Sto-Chr10 11004048 11013795 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto10g1133 MULE 2.5e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1133 - - ahf:112709060 751.125