Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1121 ATGAGCTCGAAGAAGTTGTTGCGGGTGGCTCTTTGGTTACCCATTGTGGTTTTGAGCTTGTACTTCCGCGTAATTCAATGCCAAGAAGTGAATGATTACGACCAAATTGACAATCCCGCTGTTCTTCCTCTCATTACGCAGATTGTGTACAGTCAGATTTCCAATTTGACTTCAGTTCTCAGTCAGGATATCAGCAGCCAGTCCAGTTTCTGCGTCAAAGATCCCTTTGAACAAGTAGTTCGTGGATTGGGATCCTCTCAAGTTCTAGAGAAATTTACGGAAGCTGATTGGAACCAagcatttaatttttcatctgACTTGGACTTCTTGGCTTCTTGCATTCGGAAGACTAAAGGAGATATTACACGGCGCTTGTGTACTGCAGCAGAAATCAAATTTTACTTAAATGGTTTCTTTGATAGATCTACAAGTGCTAATTATTTAAAACCTAACAAGAACTGCAATTTAACCTCATGGGTCTCTGGTTGTGAGCCAGGATGGGCCTGTAGTGTTGGTCAAAATCAGCAGGTTGACCTTAAAAACTCAGAGGAGTTACCTGCAAGAACTAAAAACTGTCAAGCTTGTTGTGAGGGCTTTTTCTGTCCTCATGGGATCACATGCATGATACctTGCCCACTAGGTTCGTATTGCCCTCTTGCGTCATTGAATAAAGCAACTGGTGTATGTGAACCGTATTTTTACCAGCTGCCTCCAATGCAGCCAAATCATACATGCGGGGGAGCAAATATCTGGGCTGACGTTAGTAGCAGTAGTGAGATATTTTGTTCTGCTGGATCATATTGCCCTACAACCACCAAAAGAATCCCTTGCAGTAGTGGACATTACTGCAGGATGGGTTCTACATCTGAGAAAAGATGCTTCAAGTTGAGTTCATGTAATTCAAACACAGCGACCCAAAATATGCATGCTTATGGAGTTATGCTCATTGCTGCTCTGAGTATGTTGCTACTCATTGTTTACAACTGTTCTGATCAAGTTCTCACTACTAGGGAAAGGAGAATGGCCAAATCCAGAGAAACAGCAGCAAGAAATGCAAGGAAGACTGCTAATGCACGCCAAAGATGGAAAGCTGCAAAAGATGCTGCCAAGAAGCGCGCAAGTGGGCTGCAAGCTCAATTGTCAGGCACATTTTCTCGTAAGAAGGATGTAGAAATTTTGGGAAAAGTTAAAATTCTGAATCAAGCAAATCCTGAAACAGAAATTGAATTGTTATCACCACCTTCTATTAACTCAAGCATGGCTGCATCTTCTTCTGCAATGCCAAAGGCAAAGGGAAAGGAACCGAGTGACTTGATGCAGATGATGTATGAAATTGAACATGACCCTGATATTAATGACAGCTTTGATGTAGAAGCTGCTAGTAATGAAAGTGTTACAGTAAATATGCCCAAAGGAAAAAGAATCAATACGCATAGCCAAATTTTTAAGTATGCATACGCTCAACTTGAAAAAGAGAAGGCTCAGCAAGAACAAAACAAGGACCTTACCTTCTCAAGAGTAATTGGAATGGCTACTAACAGTGAACAAAGAAGAAGGCCTTTAATTGATATTTCTTTCAAAGACCTGACTCTCACATTGAAAGCACAAAATAAACATCTACTGAGATGTGTTACTGGGAAAATTAAACCTGGACGTATTACTGCAGTGATGGGTCCATCAGGGGCTGGCAAGACAACGTTTCTCTCAGCTTTAGCTGGAAAGGCATTTGGATGCACTATGGCTGGCTCAATACTTGTAAATGGAAAGAATGAATCAATTCACTGCTATAAGAAAATTATCGGCTTTGTGCCTCAAGATGATATAGTTCATGGAAACCTGACAGTGGAAGAAAATCTCTGGTTCAGTGCAAAGTGCAGGCTATCTGCTGACTTGTCAAAACCAGACAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAGTCAGTGAGGAATTCCTTGGTTGGAACAGTAGAAAAGCGAGGGATATCTGGAGGCCAAAGGAAGCGTGTAAATGTTGGGTTAGAGATGGTCATGGAACCTTCACTTTTGATTTTGGATGAACCAACGTCTGGTTTGGACAGTGCATCATCTCAGCTACTTCTTAGAGCACTAAGACGTGAAGCTCTTGAGGGGGTAAACATTTGCATGGTGGTTCACCAACCCAGCTATGCCTTATTCAAGATGTTTGATGACTTGGTACTTCTGGCAAAAGGTGGTCTAACTGTCTATCATGGTTCAGTCAAGAAAGTTGAAGAATACTTTGCAGGCCTTGGGATTAAAATCCCAGAGAAGATCAATCCTCCAGACTACTTCATTGATGTTTTGGAGGGTATAGTGGTACCTAGTGGAAGCTCAGGAGTTAGTTGTAAAGAGCTACCAGTTAGATGGATGCTTCACAATGGATACCCAGTACCTCTTGATATGCGGCAGATTGCAGGAAAAAATGTTGTCTCCTCTCCAAGTGTAAATCCAGTTAATGAAGTAGATCCTGATGGTTCTGTTTATGAGGAAAAGTCGTTTGCTGGAGAATTATGGGAAGATGTGAAACACAATGTGGTGCTGCAGGGGGATAAGATACGGCTCAACTTTTTGAAGTCCAAGGATTTATCTAACCGGAGAACTCCTGGTCTTTTCAAGCAATATAAGTATTTCCTTGCAAGGATTGGGAAGCAGCGATTGCGGGATGCTAAGATCCAAGCCATAGATTATCTGATTTTATTACTTGCAGGAGCCTGCTTAGGAACACTTACTAAATCGAGTGATCAATCGTTTGGTGCAGCTGGGTACACCTATACAGTGATTGCTGTCTCTCTTCTATGCAAAATAGCGGCTTTGAGATCATTTTCTCTGGATAAATTGCAATACTGGAGGGAAAGTGATTCTGGCATGAGTAGCTTGGCTTATTTTCTGTCTAAAGACACAATCGATCATTTTAATACAGTGATCAAACCTGTGGTGTACCTTTCCATGTTCTATTTTTTCACAAATCCGAGATCCACTTTTGCAGACAATTACATTGTGCTGCTTTGTCTTGTATACTGTGTTACCGGCATAGCATATGCATTAGCCATATTCTTTGAACCTGGTGCAGCCCAGTTGTGGTCAGTACTTCTCCCAGTTGTTTTGACACTCATTGCAACACAACCAAAAGATAGTAAATTTTTGAAGGATATAGCTAATTTGTGCTACACGAAGTGGGCTTTACAAGCATTTATAATTGCAAATGCTGAGAGGTATCACGGAGTGTGGCTAATAACTCGTTGCGGTTCACTTCTGAAAAGTGGTTATAATCTTCATGCCTGGAGTTTGTGCATAAGCATCCTCATCCTTATCGGTGTAGTTAGTCGGGCAATAGCATACCTCTGTATGATCACCTTTCGAAAGAAGTAA 3399 0.4119 MSSKKLLRVALWLPIVVLSLYFRVIQCQEVNDYDQIDNPAVLPLITQIVYSQISNLTSVLSQDISSQSSFCVKDPFEQVVRGLGSSQVLEKFTEADWNQAFNFSSDLDFLASCIRKTKGDITRRLCTAAEIKFYLNGFFDRSTSANYLKPNKNCNLTSWVSGCEPGWACSVGQNQQVDLKNSEELPARTKNCQACCEGFFCPHGITCMIPCPLGSYCPLASLNKATGVCEPYFYQLPPMQPNHTCGGANIWADVSSSSEIFCSAGSYCPTTTKRIPCSSGHYCRMGSTSEKRCFKLSSCNSNTATQNMHAYGVMLIAALSMLLLIVYNCSDQVLTTRERRMAKSRETAARNARKTANARQRWKAAKDAAKKRASGLQAQLSGTFSRKKDVEILGKVKILNQANPETEIELLSPPSINSSMAASSSAMPKAKGKEPSDLMQMMYEIEHDPDINDSFDVEAASNESVTVNMPKGKRINTHSQIFKYAYAQLEKEKAQQEQNKDLTFSRVIGMATNSEQRRRPLIDISFKDLTLTLKAQNKHLLRCVTGKIKPGRITAVMGPSGAGKTTFLSALAGKAFGCTMAGSILVNGKNESIHCYKKIIGFVPQDDIVHGNLTVEENLWFSAKCRLSADLSKPDKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFKMFDDLVLLAKGGLTVYHGSVKKVEEYFAGLGIKIPEKINPPDYFIDVLEGIVVPSGSSGVSCKELPVRWMLHNGYPVPLDMRQIAGKNVVSSPSVNPVNEVDPDGSVYEEKSFAGELWEDVKHNVVLQGDKIRLNFLKSKDLSNRRTPGLFKQYKYFLARIGKQRLRDAKIQAIDYLILLLAGACLGTLTKSSDQSFGAAGYTYTVIAVSLLCKIAALRSFSLDKLQYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFFTNPRSTFADNYIVLLCLVYCVTGIAYALAIFFEPGAAQLWSVLLPVVLTLIATQPKDSKFLKDIANLCYTKWALQAFIIANAERYHGVWLITRCGSLLKSGYNLHAWSLCISILILIGVVSRAIAYLCMITFRKK 1132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1121 1132 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 524 766 IPR003439 GO:0005524
Sto10g1121 1132 Coils Coil 359 379 - -
Sto10g1121 1132 PANTHER ABC TRANSPORTER G FAMILY MEMBER 24 87 1129 - -
Sto10g1121 1132 MobiDBLite consensus disorder prediction 342 368 - -
Sto10g1121 1132 ProSitePatterns ABC transporters family signature. 665 679 IPR017871 GO:0005524
Sto10g1121 1132 Pfam ABC transporter 543 693 IPR003439 GO:0005524
Sto10g1121 1132 Pfam ABC-2 type transporter 722 1132 IPR043926 GO:0140359
Sto10g1121 1132 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 523 746 IPR027417 -
Sto10g1121 1132 Coils Coil 486 506 - -
Sto10g1121 1132 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 87 1129 - -
Sto10g1121 1132 SMART AAA_5 550 742 IPR003593 -
Sto10g1121 1132 Gene3D - 522 759 IPR027417 -
Sto10g1121 1132 CDD ABCG_EPDR 522 748 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1121 Sto-Chr10 10836243 10847162 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1121 548 744 Calmodulin-binding Proteins AT2G36910 27.228 6.55e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1121 - - lang:109341040 1774.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto8g2435 8 16668385 16687267 Sto10g1121 10 10836243 10847162 ECH
Sto8g0914 8 5756268 5761981 Sto10g1121 10 10836243 10847162 ECH
Sto13g3212 13 36113932 36120513 Sto10g1121 10 10836243 10847162 ECH
Sto10g1121 10 10836243 10847162 Sto10g1121 10 10836243 10847162 ECH