Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1059 ATGTTGGaagatttttggaaagattcaACAGATAAACCTATTGTTATTTTGCTAGAGTGGTGCAAGATCAAGGATTATCCAGGAAATAATGGTGTTCGTAAGGTTTCAAACTCCTTCTACTCAACACGTTTGCTAATAAATCCTCAACTAAAGGAATGTCAAGATTTTCTGTCCagTCAAATTTCGAATTCTTCAAGTGTTGCTGTTGAGGAGGATCTTTTGACTCTAACCGTGGCGAAAAAGATTGATGAGCTCGGTTATTCTTGTGCTGATATAAATTCATGCGTTATTCTTGGTACTGTTCTTAGTATTGATACTGGTAAAGGGTGGTACTACAATTCTTGCAGAAAATGCAAAAAGAAAGTCATTCCTGATGTTGATGGTTTCTTTTGCAAAATGTGTGGTAATCTTGTGGACTCCGTTGTTCCAAGATTTAAATTAGAGCTAAAAGTTGTTGATGAATCCGGCTGTGCTGTCTTTATACTTTTTGATTGTGAAGTTAATCAAGTTCTTGGTTGCACTGCTTCTGAATTGATTGACGGATTAGTGGTTGTATTTTCAGCATTCCCTGAACGTTTGGATGATTTCTTGGGAAAGAAATTCCTTTTCAAACTCAAGATTAAGGATGATAGATTTTCTAAAATAGATCCAAAGTATATTGTTATGTTGAGGATGTCTGATAAAGAAAGTTTAATTGAACAGTACAATCGTAACAAAGATGGGAATGAGGAATCTCCATGTAATAGGCATGCAGCAGTTTTCTCGGACATTGATAAGgAGACTTTGACCATTATTCTGAAAGACTCATCTGAAAATTGTATAACTCCTGCAAAAAGGCTGAGTGGAGATTTTGATGAAGAAGGTTCTCCGTTGACTGCCGAAGTTCCATCTGAGAATTCCTcaaacaaattgaagaagatCATCAAAGTAGAACCATGGGCATATTTGTTAAGCACCTTTAGTTTAATTTCCTCTTAG 978 0.3466 MLEDFWKDSTDKPIVILLEWCKIKDYPGNNGVRKVSNSFYSTRLLINPQLKECQDFLSSQISNSSSVAVEEDLLTLTVAKKIDELGYSCADINSCVILGTVLSIDTGKGWYYNSCRKCKKKVIPDVDGFFCKMCGNLVDSVVPRFKLELKVVDESGCAVFILFDCEVNQVLGCTASELIDGLVVVFSAFPERLDDFLGKKFLFKLKIKDDRFSKIDPKYIVMLRMSDKESLIEQYNRNKDGNEESPCNRHAAVFSDIDKETLTIILKDSSENCITPAKRLSGDFDEEGSPLTAEVPSENSSNKLKKIIKVEPWAYLLSTFSLISS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1059 325 Pfam Replication factor-A C terminal domain 99 214 IPR013955 -
Sto10g1059 325 PANTHER BNAC01G35430D PROTEIN 99 246 - -
Sto10g1059 325 Gene3D - 59 235 IPR012340 -
Sto10g1059 325 CDD RPA1_DBD_C 95 203 IPR013955 -
Sto10g1059 325 SUPERFAMILY Nucleic acid-binding proteins 95 221 IPR012340 -
Sto10g1059 325 PANTHER REPLICATION FACTOR A 1, RFA1 99 246 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1059 Sto-Chr10 10197032 10198561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1059 111 178 Core DNA Replication Machinery Family AT5G61000 34.783 1.95e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1059 - - soe:110777624 120.168