Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g1042 ATGATGAGTCATTATTGTTCTCAGCTCTTTTTCATTTTGCTTTTATCCATTTTTGTGGGACTTTGTTTGGCTTCACCTATCGGAGATCAAAGGAGAGATAGAATCACTGAGCTACCTGGACAACCAAAGAATGTGGGTTTTGCTCAGTACTCGGGTTATGTGACTGTGAATAAGGAGTCGGGGAGAGCATTGTTTTACTGGTTGACTGAGGCGCCGGCTAGTCGTGCTCCTCGGTTGAGGCCACTTGTGTTATGGCTTAATGGTGGTCCTGGATGCTCCTCCATTGGTTATGGGGCATCTGAAGAAATAGGCCCTTTTCGGATTAGGTCTGATGGGAAGTCACTTTTCATGAATCCTTATGCTTGGAACAAGTTGGCAAATGTATTGTTCATTGATTCTCCTGCTGGTGTTGGTTTTTCATATACCAATAAATCATCAGATCTGTATACAATGGGAGACCAGAGAACAGCTGAAGATGCTTATACATTTCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAACACAGAGAATTCTACATTGCTGGAGAGAGTTATGCAGGTCATTATGTTCCTCAGTTGGCTCAGCTTGTTTACCAGAGAAACAAGGGGATCAAGAATCCGGTTATAAATTTTAAGGGATTTATGGTTGGAAATGCTGTAACAGATGATTACCATGATTACGTTGGAACATTTGAGTACTGGTGGACACATGGTTTGATTTCGGATTCCACATATAGGATGCTGCGAATTGCCTGTAAGTCTGGGTCCTCCCAGCATCCAACAGTACAATGCATGGAGGCTCTTAGAGTTGCAGTTGTGGAACAGGGGAACATAGATCCGTATAGCATTTATACACAGCCATGCAATAATACAGCATCGCTGAGACGTAGCTTGAGGGGTCACTATCCATGGATGTCTCGAGCATATGATCCCTGTACCGAGAGGTATGCTGACTTGTACTTCAATCGTCCTGAAGTTCAGAAGGCTCTACATGCCAATGTAACTGGCATTCCATATTCATGGAAGTCATGCAGTGATATTGTTGGGAGTTATTGGACGGATTCTCCACTGTCTATGCTTCCTATATATCAAGAGCTCATTAATGCTGGTCTCAAGATCTGGGTATACAGTGGGGATACAGATGCTGTGGTTCCAGTGACTGCAACTCGATATTCTATTGATTCTTTGAAGCTACCCACCATCATTAACTGGTATCCTTGGAATGATAATGGCAAGGTTGGTGGGTGGAGTCAAGTTTATAAAGGCCTCACATTGGTTACAATTACAGGAGCAGGACATGAGGTTCCACTTCACAAGCCTCGTCAAGCATTTATTCTTTTCAGGTCATTCTTGGAGAATAAAAACATGCCAAATTGA 1380 0.4254 MMSHYCSQLFFILLLSIFVGLCLASPIGDQRRDRITELPGQPKNVGFAQYSGYVTVNKESGRALFYWLTEAPASRAPRLRPLVLWLNGGPGCSSIGYGASEEIGPFRIRSDGKSLFMNPYAWNKLANVLFIDSPAGVGFSYTNKSSDLYTMGDQRTAEDAYTFLVNWFERFPQYKHREFYIAGESYAGHYVPQLAQLVYQRNKGIKNPVINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLISDSTYRMLRIACKSGSSQHPTVQCMEALRVAVVEQGNIDPYSIYTQPCNNTASLRRSLRGHYPWMSRAYDPCTERYADLYFNRPEVQKALHANVTGIPYSWKSCSDIVGSYWTDSPLSMLPIYQELINAGLKIWVYSGDTDAVVPVTATRYSIDSLKLPTIINWYPWNDNGKVGGWSQVYKGLTLVTITGAGHEVPLHKPRQAFILFRSFLENKNMPN 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g1042 459 PANTHER CARBOXYPEPTIDASE 16 458 - -
Sto10g1042 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Sto10g1042 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Sto10g1042 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Sto10g1042 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Sto10g1042 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 458 IPR001563 GO:0004185|GO:0006508
Sto10g1042 459 Gene3D alpha/beta hydrolase 30 291 IPR029058 -
Sto10g1042 459 Gene3D - 313 349 - -
Sto10g1042 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 424 441 IPR033124 GO:0004185
Sto10g1042 459 SUPERFAMILY alpha/beta-Hydrolases 30 457 IPR029058 -
Sto10g1042 459 Gene3D - 360 453 - -
Sto10g1042 459 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Sto10g1042 459 Pfam Serine carboxypeptidase 39 454 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g1042 Sto-Chr10 10076321 10081632 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g1042 318 455 Calmodulin-binding Proteins AT2G22960 30.935 1.01e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g1042 K16297 - gmx:100812000 848.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g1042 10 10076321 10081632 Sto10g1042 10 10076321 10081632 ECH