Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0960 ATGTCTCTTAATCTTCCTTACACCTCACAGTCATCACCTTTTCCCGTTGGCTTTAGATTTGCCCAATTTGATGATGAGATCATTCTTCATTATTTGGCTCCAAAAATTGCTGACAAACAATTATCCTTTAACATAATTGAGGAGGTGAACGTATATCAATATGACCCTCAAACTCTTTCAGaACAATACACGGCTCAAGGTGAGGAAAAATGGTACTTCTTGAGTACAAGAGATAAGGTTAATAAAAATGGAGGAAGTAATAAAAAACGAACCACaggggattttggattttggagaaTTACAGATTCTCCACACCCTATAAATTCTGAGGGTCTTCAGATTGGAAGTAAAACAACTCTAGTATACTTTCGAGGTAAATCTTCCGATGCTAAGAAGACAAATTGGATCATGCACGAATTCGAGGCTAAGTCTTCACCAGATGCAAAGgttgATGATATTGTCATATGTAGAATATACGAGAGGAAAGCCTGCAGTACTAAAAAGAGAGCTCGTGTGGAAGAAACGGTGGCTCAACCACAACCAATGAATCAAATTCCCAATAATAATTCAGATAATAATTACCCCTATGCTCAAGAAGAATCTGCTTCATTTATGCAACCTCATCAAGACCTTGCTCCATATGGCCATATTTCAAATTCTTCTCATAACATGCatcaacaaataatatataacatggtGCAGCAACCACGGCCATTGAATCTGGCTGCTTATACCCCACAATCAAATTCTtctgataataataatatgcatcaacaaataatatataacatggtGCAGCAACCACGGCCATTGAATCTGGCTGCTTATACCCCACAATCAAATTCTTCTGACAATAATAATATGCATCAACAAATCATATATAACATGGTGCAGCAACCACGGCCATTAAATCTGGCTGCTTATACCCCACAAACAAATTCTtctgataataataatatgcatcaacaaataatatataacatggtGCAACCACGGCCATTGGATCAAGCTGCTTATACCCCACAATCAAATTCTTCTGATAATATGCATCAACAAATAATATATGACAATCAGATTGAGAGGCATCCGCATGAACACATGGTGCAACCAGTGATTATGAATCAGAATTATGTCACAATCAAATTCTCCAGATAA 1155 0.3377 MSLNLPYTSQSSPFPVGFRFAQFDDEIILHYLAPKIADKQLSFNIIEEVNVYQYDPQTLSEQYTAQGEEKWYFLSTRDKVNKNGGSNKKRTTGDFGFWRITDSPHPINSEGLQIGSKTTLVYFRGKSSDAKKTNWIMHEFEAKSSPDAKVDDIVICRIYERKACSTKKRARVEETVAQPQPMNQIPNNNSDNNYPYAQEESASFMQPHQDLAPYGHISNSSHNMHQQIIYNMVQQPRPLNLAAYTPQSNSSDNNNMHQQIIYNMVQQPRPLNLAAYTPQSNSSDNNNMHQQIIYNMVQQPRPLNLAAYTPQTNSSDNNNMHQQIIYNMVQPRPLDQAAYTPQSNSSDNMHQQIIYDNQIERHPHEHMVQPVIMNQNYVTIKFSR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0960 384 ProSiteProfiles NAC domain profile. 14 161 IPR003441 GO:0003677|GO:0006355
Sto10g0960 384 PANTHER NAC TRANSCRIPTION FACTOR 56 10 305 - -
Sto10g0960 384 Gene3D NAC domain 24 165 IPR036093 GO:0003677|GO:0006355
Sto10g0960 384 SUPERFAMILY NAC domain 8 160 IPR036093 GO:0003677|GO:0006355
Sto10g0960 384 Pfam No apical meristem (NAM) protein 15 141 IPR003441 GO:0003677|GO:0006355
Sto10g0960 384 PANTHER NAC DOMAIN-CONTAINING PROTEIN 102-LIKE 10 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0960 Sto-Chr10 9332161 9335693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0960 14 168 NAC Transcription Factor Family AT3G15500 37.736 9.44e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto10g0960 NAM 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0960 - - pvy:116108860 150.984