Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0956 atggaagaagaaaaagccCTAGCCCTAAATTCTATCGCTCCTTCTCCTCTCAATCGCAGCAATTCATCTCCGTTTCCTTCGCGAATGGGCCGTGATTCTTCCGCTTCACTTGCTCCCGGATTCCGATTCCACCCCACCGACGAAGAACTCGTTCGTTACTACCTCAAGCGCAAGGTCACCGGCAAATCCTTCCGGTTTGACCCAATCGCCGTCATCGACATCTACAAATCCGAACCTTGGGACCTCCCTTATCAGTCAAAGCTGAAGAGCAGGGACTTGGAGTGGTACTTCTTCAGTGCGTTGGACAAGAAGTATGTGAATGGGTCGAAGACTAATCGAGCCACTGAGAAAGGGTACTGGAAGACTACAGGAAAGGATCGCCCAGTGCGAAACAGCACGCGAATAGTAGGAATGAAGAAGACGCTCGTTTATCATAGTGGGCGGGCGCCACGTGGTGCGCGTACCAATTGGGTTATGCATGAATACAGATTGACTGATGAAGAATTGGAGAAAGCTGGAATAGCACAGAATGCGTTTGTCCTCTGTAGGATTTTCGAGAAGAGTGGTACAGGGCCAAAGAATGGAGAGCAGTATGGTGCCCCCTTTGTAGAGGAGGAATGGGAAGATGATGAGGTTGTAATGGTTCCATTACCAGGTGATGAGGCTGTCACTGATGAAGTGGCAAATGGTGATTGTGCTTTTGTTGAAACAAATGACCCCGACCAGTACCTTGATATGGGTGTAGCATCTGAAAGTGATGGTCTtccattgaacttttataatGGGGAGTGTAGCAGCTATCCTGGGCATTCTGAGGAATTTACTGAAGATCAGAAGCCCATCGTAGGCACTGTTGAAACTTTTGAGCCTCAAAATGACCAATTGTTGAATATGCCTGAGCAATATGCCGTGGACAGCAAACCAATGACAGATGGTATTAATGGTGAAGCAAGTCATAGTGAGAATCCCCTGAATTTCAACTATGCATTTGATGCTTCGTACTTGGATGCCACTGATAATCTTCTTGTCGGTGAAGGATCATTTTTGGAAACCAATGATCTACTGAATCCTGTTGAGGCGAATTCTGTGGGGACTGTTGCTGCTGATGTTGATATGCCAGACGAGTATCTTACATACTTTGATGCAGATGATGATATTACCCAATACATAACATTTGATTCTCCTGAGTATACAGGTAGTGAAAATGCTGTTTCTGACCAAGGACCTCCTTTAACCCAGCAGAATGTGGATGAAGAAGCCAAGGAAGTTCCCATGGAAAGTAAAAATGATTTACAACCACTTCCTAGTGAAGAAGCTTCTTCTTCTAAGCAGCACCCAGAGGAGTCAAAATTGGTATCAGGAAAAACATATCCTTTTATGAAGCAGGCCAGTCACTTCTTGGGAAGCATCCCTGCTCCCCCCGCATTTGCTTCGGAGTTTCCTTCTAAGGAGATCGCACTCCGGCTTCATTCCGGTCAATCTTCCAATTCAGCTCACGTAACTGCTGGTATGATCAGAATAACAGACTTCACCATTGGAGGCAACGAGATGAACTGGATGATGGGCAAGAATGGGGAGTTCAATGTTGCATTATCACCTTCGTTTTCTCAGACTGACGTCAATTCTGCTGCTGCTTTAGTGCCTGTTTCTGGTTTGATCTCCGGCAAGTTTGCTTTCATGGTGTCACATGGCTGGatattcttaatttctttttcagttGTGATTCTTTCACTGAGTTTCAAGATTGGATGTTTCATGTATACTGGTAAATCTAAATGA 1779 0.4424 MEEEKALALNSIAPSPLNRSNSSPFPSRMGRDSSASLAPGFRFHPTDEELVRYYLKRKVTGKSFRFDPIAVIDIYKSEPWDLPYQSKLKSRDLEWYFFSALDKKYVNGSKTNRATEKGYWKTTGKDRPVRNSTRIVGMKKTLVYHSGRAPRGARTNWVMHEYRLTDEELEKAGIAQNAFVLCRIFEKSGTGPKNGEQYGAPFVEEEWEDDEVVMVPLPGDEAVTDEVANGDCAFVETNDPDQYLDMGVASESDGLPLNFYNGECSSYPGHSEEFTEDQKPIVGTVETFEPQNDQLLNMPEQYAVDSKPMTDGINGEASHSENPLNFNYAFDASYLDATDNLLVGEGSFLETNDLLNPVEANSVGTVAADVDMPDEYLTYFDADDDITQYITFDSPEYTGSENAVSDQGPPLTQQNVDEEAKEVPMESKNDLQPLPSEEASSSKQHPEESKLVSGKTYPFMKQASHFLGSIPAPPAFASEFPSKEIALRLHSGQSSNSAHVTAGMIRITDFTIGGNEMNWMMGKNGEFNVALSPSFSQTDVNSAAALVPVSGLISGKFAFMVSHGWIFLISFSVVILSLSFKIGCFMYTGKSK 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0956 592 MobiDBLite consensus disorder prediction 1 40 - -
Sto10g0956 592 Gene3D NAC domain 46 190 IPR036093 GO:0003677|GO:0006355
Sto10g0956 592 ProSiteProfiles NAC domain profile. 37 187 IPR003441 GO:0003677|GO:0006355
Sto10g0956 592 MobiDBLite consensus disorder prediction 397 452 - -
Sto10g0956 592 SUPERFAMILY NAC domain 34 187 IPR036093 GO:0003677|GO:0006355
Sto10g0956 592 PANTHER NAC DOMAIN-CONTAINING PROTEIN 53-LIKE 32 585 - -
Sto10g0956 592 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 32 585 - -
Sto10g0956 592 Pfam No apical meristem (NAM) protein 39 164 IPR003441 GO:0003677|GO:0006355
Sto10g0956 592 MobiDBLite consensus disorder prediction 13 30 - -
Sto10g0956 592 MobiDBLite consensus disorder prediction 397 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0956 Sto-Chr10 9301337 9304911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0956 29 578 NAC Transcription Factor Family AT5G04410 45.377 3.84e-156 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Sto10g0956 NAM 2.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0956 - - qsu:111992092 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0956 10 9301337 9304911 Sto10g0956 10 9301337 9304911 ECH