Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0953 ATGATGAACAACATGAAGGTGAACTCGTCCAATTGTGTTAGGTGGATCGGTTGGGAACCTCCAGATCACGATAGAGTGAAGTGCAATGTGGATGGCTCTTACTTCAAGTCAACTAGAGATGCCGCTTGTGGCGGCATTGCACGCGACACTTCTGGTAACTTCCTTTTCAGTTTTTGTCACCGGATTGGATGTTGTGAAATTATTCGGGCCGAGCTTAGAGGCATTGTTGATGGCTTGGAGATGCTTTGGGAGAAAGGCTTTCGTAAGGTAACGATCGAGTGTGACTCAGAGGTTGCTTTGGAGCTTGTTTCAAATGGTGTTGTTGATACTCACCCGTGTTCGGCGCTGGTGCAACGGGTTAGGAGTTTGATAGATCGTCATTGGGATACTGAGCTGGTCCATGTCTTTCGGGAAGCCAATCAAGCTGCGGACTTCATGGCAAAGCTGAGCCACTCCCTCGCAGAAGGCTTTCATGTCTTTGACTCTCCCCATGTTGGTCTTAGATCTATTCTTGCTGCTGATCTTAATAGTCCTTTGGTGCCACGTCTTTGTAGCTTCCATAGGATAGGTGATGGCGCACTGGACATGAGGAGGATGAAAAAGAGGGAGCTAGCTGGCGTGGACATTCGATGTTCTGAATGTGCTTCAGGCAGTGAGATTGTTGGGGACAAGAAGAAGGCATTATATGTGGGTGTTGGTGATGATGTTGTTCACGATCTTCTTGATTCCGGAGACGAAGGGGATTCCCATAAGAGAAGAGTTGTTCTTGTTGTAGAAGCTACTGTCCCCTCGAACCAGCTTTTAGGCAGTGATGTGAGGTCGCCGAGCAAATTCGATAACGCTTATATCCAGAACATTCTTCGTGGGCTAGGCCTGCTGACGTCAGACCACGCGCTGAGTGTGGACCCGAGGACGAGGCCCATCGTGGAGATCTACGCGAGGAACCAGACGGCGTTCTTTGTGGATTTCGCGGCGGCGATGGAGAAGGTTTCGGTGCTCAATGTGAAGACGGGGAGGAAGGGAGAGATAAGAGATAGGTGTGATCAGTTCAATCATATTCCaatgtag 1068 0.4897 MMNNMKVNSSNCVRWIGWEPPDHDRVKCNVDGSYFKSTRDAACGGIARDTSGNFLFSFCHRIGCCEIIRAELRGIVDGLEMLWEKGFRKVTIECDSEVALELVSNGVVDTHPCSALVQRVRSLIDRHWDTELVHVFREANQAADFMAKLSHSLAEGFHVFDSPHVGLRSILAADLNSPLVPRLCSFHRIGDGALDMRRMKKRELAGVDIRCSECASGSEIVGDKKKALYVGVGDDVVHDLLDSGDEGDSHKRRVVLVVEATVPSNQLLGSDVRSPSKFDNAYIQNILRGLGLLTSDHALSVDPRTRPIVEIYARNQTAFFVDFAAAMEKVSVLNVKTGRKGEIRDRCDQFNHIPM 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0953 355 ProSiteProfiles Plant heme peroxidase family profile. 87 351 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g0953 355 SUPERFAMILY Ribonuclease H-like 26 151 IPR012337 -
Sto10g0953 355 PANTHER PEROXIDASE 41 270 353 - -
Sto10g0953 355 SUPERFAMILY Heme-dependent peroxidases 269 351 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sto10g0953 355 Pfam Peroxidase 269 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g0953 355 PANTHER - 270 353 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0953 355 Gene3D - 23 151 IPR036397 GO:0003676
Sto10g0953 355 Pfam Reverse transcriptase-like 29 148 IPR002156 GO:0003676|GO:0004523
Sto10g0953 355 Gene3D Peroxidase, domain 2 250 330 - -
Sto10g0953 355 CDD RNase_H_like 28 148 IPR044730 -
Sto10g0953 355 PRINTS Plant peroxidase signature 155 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0953 355 PRINTS Plant peroxidase signature 269 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0953 355 PRINTS Plant peroxidase signature 285 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0953 355 PRINTS Plant peroxidase signature 325 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0953 Sto-Chr10 9256390 9262821 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0953 270 351 Peroxidase AT5G40150 64.634 6.00e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0953 K00430 - gmx:100776496 138.272