Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0875 ATGTTGGCGATGGAGAAGGATTTTGATTCCAAGTTGAGGATTCAAGGTAATTCTTCTAACGGCGGGAATGTGCAGAGATCTCAGAGCATTCCCTTCCGAGCTCCCCAGGAGAATTACACCATCAATGACTTTGAATTGGGCAAGATCTACGGCGTTGGTTCTTATTCTAAGGTTGTGAGGGCAAAGAAGAAGGACACGGGAACTGTGTATGCATTGAAGATCATGGACAAAAAATTTATCACAAAAGAGAACAAAACAGCTTATGTGAAGTTGGAGCGCATTGTGCTTGATCAATTGGACCATCCTGGCATTGTGCGGCTGTTTTTCACATTTCAAGACACATATTCTCTGTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTATTTGATCAAATAACCAGGAAAGGTCGCCTTTCAGAGGATGAAGCACGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAATACATACATAATTTGGGTCTGATACATCGCGATATTAAGCCCGAGAACTTGTTGCTTACAGCTGAAGGACATATTAAAATAGCTGATTTTGGGAGTGTGAAGCCTATGCAGGGTAGCCAAATCACAGTCCTTCCTAATGCAACATCAGatgATAAAGCCTGCACATTTGTGGGGACAGCTGCTTATGTCCCTCCGGAGGTTCTTAATTCTGCTCCAGCAACTTTTGGAAATGACCTCTGGGCACTTGGATGTACATTATACCAAATGCTGTCAGGAACTTCTCCTTTTAAAGATGCAAGTGAATGGCTTATTTTCCAAAGAATCATTGCGAGAGATATTCGATTCCCAGATTATTTTTCTGATGAAGCTAGAGACCTTATTGACCAGTTATTGGATTTGGATCCCAGCAGGAGACCAGGTGCAGGACCTGACGGTTATATTGTTTTGAAAAGGCATCCCTTTTTCAGGGGAGTTGATTGGAGTAACTTAAGGGATCAAAGGCCCCCAAGACTTGCTATGGAACCCGGGATGCAGTCACCTGAAGGTGATTATGTTCATGATTCATCATGGAATCTGTCTCACATTGGTGATGGTTCTATCAGGCAACCTGATGGAAATACAGGTGCTGCTTCATCTTCTGAAGGAACCGGTCACATAACTAGGCTAGCCTCTATGGATTCTTTTGATTCCAAATGGGAACAATTTTTGGACCCTGGTGAATCTATTCTTATGATCTCAATGGTAAAGAAGATACAGAAACTAACAAGCAAGAAGGTGCAGCTGATCCTTACAAACAAGCCAAAGTTGATCTACGTGGACCCTTCAAAGCTTATTGTGAAGGGAAATATAATATGGTCTGATAATCCGAAGGATCTAAGCATCCAAGTGACAAGTCCTTCACATTTCAAAATTTGCACACCAAAAAAGGTGATGTCATTTGAGGATGCGAAGCAAAAGGCTTATCAGTGGAAGAAAGCAATTGAAGGGCTACAAAATcggtga 1470 0.419 MLAMEKDFDSKLRIQGNSSNGGNVQRSQSIPFRAPQENYTINDFELGKIYGVGSYSKVVRAKKKDTGTVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLFFTFQDTYSLYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHNLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQGSQITVLPNATSDDKACTFVGTAAYVPPEVLNSAPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSDEARDLIDQLLDLDPSRRPGAGPDGYIVLKRHPFFRGVDWSNLRDQRPPRLAMEPGMQSPEGDYVHDSSWNLSHIGDGSIRQPDGNTGAASSSEGTGHITRLASMDSFDSKWEQFLDPGESILMISMVKKIQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIIWSDNPKDLSIQVTSPSHFKICTPKKVMSFEDAKQKAYQWKKAIEGLQNR 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0875 489 SMART serkin_6 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0875 489 CDD STKc_PDK1 42 311 IPR039046 GO:0004674
Sto10g0875 489 Gene3D Transferase(Phosphotransferase) domain 1 128 323 - -
Sto10g0875 489 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Sto10g0875 489 MobiDBLite consensus disorder prediction 352 372 - -
Sto10g0875 489 Pfam PH domain 386 488 IPR033931 -
Sto10g0875 489 SUPERFAMILY Protein kinase-like (PK-like) 41 363 IPR011009 -
Sto10g0875 489 Gene3D - 357 489 IPR011993 -
Sto10g0875 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Sto10g0875 489 ProSiteProfiles Protein kinase domain profile. 44 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0875 489 MobiDBLite consensus disorder prediction 13 28 - -
Sto10g0875 489 MobiDBLite consensus disorder prediction 1 28 - -
Sto10g0875 489 Pfam Protein kinase domain 46 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0875 489 PANTHER 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1 18 485 - -
Sto10g0875 489 SUPERFAMILY PH domain-like 305 488 - -
Sto10g0875 489 PANTHER SERINE/THREONINE-PROTEIN KINASE 18 485 - -
Sto10g0875 489 Coils Coil 469 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0875 Sto-Chr10 8252323 8260427 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0875 1 489 AGC Kinase Gene Family AT3G10540 81.504 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Sto10g0875 Pkinase 1.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0875 K06276 - gmx:100801891 883.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0875 10 8252323 8260427 Sto10g0875 10 8252323 8260427 ECH