Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0844 CTGATTTGTAACTTTTGCCCTAGAGAGTTTCTTTTGCGCTTCTTCGAGTTCGTCGTCGTTTGCTCAGAGAAAGGTTGTATCAGTCGCCGTTCATCGTCACTCGCCGCCGTCACCTCACAGCCGTCAAACGGAGTCGACGCCGCTGCCAAAGCCCGCCTCAGTCCATCACAAGCAATATTGGACTTATGTTTGGCATCATCCTTCATTGCAAGTGCTATGCTAAATCTGATTCCAGCCATCACCTTTGTGATTACAGCTTTTACAggGTTGAATGAAGTATTTCGTTTTAAAAGTTTGGTCCATTTTGCAAATTGTTCATCAGAGAAGGAGGGATCGGAGGAAGGATCTGCAAAAATGGGTACTAATCAAGGGCaggcagaggcagaggcagagTTGTTTCAAGCTCAGTGCCATTTGTACAAACACAGCTACAATTTCATGACCTCCATGTCTCTAAAAGCTGCACTACAACTGAACTTACCAGATATAATCCATAGCCATGGCCGACCCATGACCCTCCCTGAGCTGCTCTTGGCTCTCCAGATTGAGCCTGCCAAATCTGGCCATCTCTATAGGCTCATGCGCTTGCTTCTCCTCAAACACCATGTCCCAACCTTATCCCCATACGTGGAGGCAATGTTTCATACAGCTTTGGTGCATACATCAGAGTTCTTGGGAGATTGGTTCCAAGGGAAGGAGCTCACTCCATTTCACACTGCAAATAATGGGATGGGGTTTTGGGACTATCTGAGTCAGAACCAGGAGTTCAGTACACTCTTCAATGGAGCAATGAGCAGTGATTCTAGCATGATGAACTTGGTTATCAAAGGCTGTGGATCCGTTTTTGAGGGACTCAATTCACTGGTTGATGTTGGGGGTGGTAAAGGAGCTGCCTCTAGGATCATCTCTGAGTCATTGCCTAATGTGCAGTGCACTGTGCTAGATCTTCCACATGTTGTGGAGAATATGTCAGATAGCAGTAATTTGAAGTTTGTTGGAGGTGATATGTTTCAGTCTATTCCTTCAGCAGATGCTGTTCTTCTCAAGCTGGTTTTACATGCTTTTAGCGATGAAGACTGTGTGAAGGTGCTGAAGAAGTGCAGGGAAGCAATTGCCAGCAAAGGGAAGGAAGGGAAAGTGATAATCATAGATATAGTGATAAATGTGAAGGATGATGGGCACGAATTGAAAGAAGCAAAGCTCTTATTCGATGTGGTGATGATGGTTTATGTCAccggaaaagagagagaggaaaaataA 1260 0.4333 LICNFCPREFLLRFFEFVVVCSEKGCISRRSSSLAAVTSQPSNGVDAAAKARLSPSQAILDLCLASSFIASAMLNLIPAITFVITAFTGLNEVFRFKSLVHFANCSSEKEGSEEGSAKMGTNQGQAEAEAELFQAQCHLYKHSYNFMTSMSLKAALQLNLPDIIHSHGRPMTLPELLLALQIEPAKSGHLYRLMRLLLLKHHVPTLSPYVEAMFHTALVHTSEFLGDWFQGKELTPFHTANNGMGFWDYLSQNQEFSTLFNGAMSSDSSMMNLVIKGCGSVFEGLNSLVDVGGGKGAASRIISESLPNVQCTVLDLPHVVENMSDSSNLKFVGGDMFQSIPSADAVLLKLVLHAFSDEDCVKVLKKCREAIASKGKEGKVIIIDIVINVKDDGHELKEAKLLFDVVMMVYVTGKEREEK 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0844 419 SUPERFAMILY "Winged helix" DNA-binding domain 129 204 IPR036390 -
Sto10g0844 419 PANTHER ASMT2 197 419 - -
Sto10g0844 419 PANTHER ASMT2 127 197 - -
Sto10g0844 419 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 140 419 IPR016461 GO:0008168
Sto10g0844 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 205 417 IPR029063 -
Sto10g0844 419 PANTHER O-METHYLTRANSFERASE 197 419 IPR016461 GO:0008168
Sto10g0844 419 PANTHER O-METHYLTRANSFERASE 127 197 IPR016461 GO:0008168
Sto10g0844 419 Gene3D Vaccinia Virus protein VP39 203 419 IPR029063 -
Sto10g0844 419 Pfam Dimerisation domain 150 197 IPR012967 GO:0046983
Sto10g0844 419 Pfam O-methyltransferase domain 225 419 IPR001077 GO:0008171
Sto10g0844 419 Gene3D - 121 202 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0844 Sto-Chr10 7956789 7965341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0844 150 419 Monolignol Biosynthesis Gene Families AT5G54160 32.343 1.23e-36 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0844 K22588 - qsu:112018723 350.903