Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0839 ATGGGTGACCCGTATCCATACCCGTACCCGTATCTCGGGATACCCGATGTCCGGCACCTCACAGGCGCGGCTCCTCGTGCTGATGATCTGGCGGCGGCGGAGGCACCGAGGTGTCTGGGCCTGGGCCTGGGCTACGACGTCGTTTTGTCTCATGCCTTCAActtccctcctcctcctcctccatccCAAAATCAGCATCATGTGTATCATTATGCTACAACCACAAACCCTACTGTTCCCAACGGTAATTCActagatcatcatcatcatgatcttCAAGATCAAGCAGCTAGTGCAATATtctgtaataataataataataataagagtaaTAGtatagaagaagatgaaaagggATCATCAGGATGGGTTGGAATTGGATTCGATGCTGctcctaataataataacagatGGCCCAGACAGGAGACCCTTTCCCTCTTGGACATCAGATCTCGTCTTGATTCCAAGTTCAGAGACACCAATCACAAAGGCCCTCTCTGGAATCAAATTTCTAGGATAATGGAAGAGGAATACGGGTACCAAAGAAGTGGGAAGAAATGCAAAGAGAAGTTTGAGAATTTGTACAAATATTACAAGAAGACGAAGGAAGGGAAAGGAGGTAGTAGGCATCATCAAGATGGGAAGCATTATAGATTCTTCCGCCAGCTTGAAGCAATTTgtggatcatcatcatcatcacaatcTCCTCATGCCTTATTAAACACTacaactactactactacttcttcttctcctaataataataattaccaaACTCCCCTTGTAAACATCATCAAACATGGCAATCAACTCCATCATCATTGTAACAATATGATCAACAAGTGTTGTTCAAATTATAGCCTCAGCCTCCTctccaataataataatgaccAATTTGAGACATCCTCGTCcgagaacaacaacaacaatgacGACGCCGCCGTCGAGGATTTGTCGGCCGTTGCTTATACGGTGAAGCAGAAAGGGATAGAGATAGAGGAGGAGCATCGTGGGAGAGTGCATGGACATGATGGAAGGATTGGGAggagatcatcatcatcaaccaaGGTTGAGGAGCTAGTGGACTCACACATGAGGAAGATAATGGAGAGCCAAGAAGCTTGGATGGAGAAgatgatgagagtggttgagcAAAGAGAGCAAGAAGTTATGGCCACAAGTAAGGAGCAAGAAGAGACAAGGAAGAAGAGACCGGATTCTTCGACGACGACGGGGCTTTTGGACCGACAAGTGTGCGAGCTCGGGgcgagagagagagcttggatTGAAGCAAGAGACACTGCTTTAATGGAGGTCATCATGAAGAGACACTACAATGTGGAAAGAAAAGAActtgaagaaggagaagacgagAAGGGCAAAATTGTAATTAGCAATGGTAGTAGTGGGCATGGGTGGACAGAATTGGAGATCTCAAATTTGATAGAGCTTAGGAATGGTTTTGAAGTGAGATTGCATGAAGGTGGATGCTTAGtggagaataataataataataatggaagaagaagaagaagaagtgtttGGGATGAAATTGCTGCAAAAATgagtggttttgggtttaatagGAGTGCTAGTGAGTGCAAGCAAATATGGGGTGAGATTAGCATCTCTCTCAACAAGACAATAATGGAGAATAGGTGA 1662 0.355 MGDPYPYPYPYLGIPDVRHLTGAAPRADDLAAAEAPRCLGLGLGYDVVLSHAFNFPPPPPPSQNQHHVYHYATTTNPTVPNGNSLDHHHHDLQDQAASAIFCNNNNNNKSNSIEEDEKGSSGWVGIGFDAAPNNNNRWPRQETLSLLDIRSRLDSKFRDTNHKGPLWNQISRIMEEEYGYQRSGKKCKEKFENLYKYYKKTKEGKGGSRHHQDGKHYRFFRQLEAICGSSSSSQSPHALLNTTTTTTTSSSPNNNNYQTPLVNIIKHGNQLHHHCNNMINKCCSNYSLSLLSNNNNDQFETSSSENNNNNDDAAVEDLSAVAYTVKQKGIEIEEEHRGRVHGHDGRIGRRSSSSTKVEELVDSHMRKIMESQEAWMEKMMRVVEQREQEVMATSKEQEETRKKRPDSSTTTGLLDRQVCELGARERAWIEARDTALMEVIMKRHYNVERKELEEGEDEKGKIVISNGSSGHGWTELEISNLIELRNGFEVRLHEGGCLVENNNNNNGRRRRRSVWDEIAAKMSGFGFNRSASECKQIWGEISISLNKTIMENR 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0839 553 Gene3D - 138 200 - -
Sto10g0839 553 Gene3D - 473 547 - -
Sto10g0839 553 SMART sant 134 197 IPR001005 -
Sto10g0839 553 SMART sant 469 544 IPR001005 -
Sto10g0839 553 Pfam Myb/SANT-like DNA-binding domain 472 540 IPR044822 -
Sto10g0839 553 Pfam Myb/SANT-like DNA-binding domain 136 226 IPR044822 -
Sto10g0839 553 PANTHER - 46 551 - -
Sto10g0839 553 MobiDBLite consensus disorder prediction 390 411 - -
Sto10g0839 553 CDD GT1 136 202 - -
Sto10g0839 553 ProSiteProfiles Myb-like domain profile. 130 195 IPR001005 -
Sto10g0839 553 MobiDBLite consensus disorder prediction 229 257 - -
Sto10g0839 553 MobiDBLite consensus disorder prediction 338 360 - -
Sto10g0839 553 MobiDBLite consensus disorder prediction 390 409 - -
Sto10g0839 553 PANTHER TRIHELIX TRANSCRIPTION FACTOR PTL-LIKE 46 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0839 Sto-Chr10 7911318 7914766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0839 9 547 Trihelix Transcription Factor Family AT5G03680 31.634 4.32e-64 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Sto10g0839 Myb_DNA-bind_4 1.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0839 - - lang:109336385 354.755