Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0804 ATGCACATGAAGATGCTTCTGCTCTCCTATGAAAATGGTTTACTGATTGCTCTAGAGGAATCCCAAAGATGCCCTCTCATGCTTTGGCTTACTAGTGGCCTTGGTTGCTCTGCCTTGTCTGCACTTACCTTTGaaatagATTTCAAGTATAATTTTGTTGATTTGCCTGCAAATACTGGATTCTCCTATGCAAAACCACCCATTGCAACTCAACGTAGTGACTCCAAACAAGTTCAACATGCCGTTCAATTTATTAGGAAGGGATACATACTTGGAAACCCTATAACTAACTTTACTGAAGATCAAAATTATAAGATCCCATTTGCTCATGGAATGGAGCTTATTTCTGATGAACTCTATCAGAGTTATGGAGAACTGCTAATCACTTATTGGGTCAATGATGTGGTTCGCAGGGCTCTTGGCATCCGTCAGGGAAGTATAGGACAATGGAAGCGATGTCTGAAAACGCCTTATGCTAAAGATATTGAAAGTAGTTTTCCATTTCATGTGGAGTTGAGTACTAAAGAATATCGTGCTCTGGTATACAGtgGAGATCATGACTTTGTAGTACCATTTTCAGCAACTCAAGCTTGGATAAGATCTCTAAATTACTCCATTGTAGATGAGTGGAGGCCATGGTTAGTCCAAACTCAAATTGCAGGttaCACGAGGATGTATTTAAATGGGATGACGTTTGCCACTGTAAAGGAAGATCCCAAAGGTGAAGTTCACATTGTCGTAGTAAATTCCCTTGTCCTTGTTTCTGTTATCGAACTCCACCATGAAGGCTATGGTGTTGTGGAAGGGGATTTCAAGGATTCGTTGAGGGAAGGAACGGAGCAGGGCATACAGCTCCAGAGTACAAAAGCAAAGAATGCTTTGCAATGTTTGAAAGGGATTTCTCAGAAGccattgtaa 918 0.4031 MHMKMLLLSYENGLLIALEESQRCPLMLWLTSGLGCSALSALTFEIDFKYNFVDLPANTGFSYAKPPIATQRSDSKQVQHAVQFIRKGYILGNPITNFTEDQNYKIPFAHGMELISDELYQSYGELLITYWVNDVVRRALGIRQGSIGQWKRCLKTPYAKDIESSFPFHVELSTKEYRALVYSGDHDFVVPFSATQAWIRSLNYSIVDEWRPWLVQTQIAGYTRMYLNGMTFATVKEDPKGEVHIVVVNSLVLVSVIELHHEGYGVVEGDFKDSLREGTEQGIQLQSTKAKNALQCLKGISQKPL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0804 305 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 87 123 IPR001563 GO:0004185|GO:0006508
Sto10g0804 305 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 132 237 IPR001563 GO:0004185|GO:0006508
Sto10g0804 305 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 52 87 IPR001563 GO:0004185|GO:0006508
Sto10g0804 305 Pfam Serine carboxypeptidase 129 237 IPR001563 GO:0004185|GO:0006508
Sto10g0804 305 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 87 123 - -
Sto10g0804 305 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 52 87 - -
Sto10g0804 305 PANTHER PEPTIDASE S10, SERINE CARBOXYPEPTIDASE, ALPHA/BETA HYDROLASE-RELATED 132 237 - -
Sto10g0804 305 SUPERFAMILY alpha/beta-Hydrolases 22 236 IPR029058 -
Sto10g0804 305 Gene3D alpha/beta hydrolase 15 86 IPR029058 -
Sto10g0804 305 Gene3D alpha/beta hydrolase 124 237 IPR029058 -
Sto10g0804 305 Gene3D alpha/beta hydrolase 87 123 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0804 Sto-Chr10 7548630 7558118 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0804 127 236 Calmodulin-binding Proteins AT2G22960 58.929 2.08e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0804 K16296 - gmx:100801015 229.565