Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0803 ATGCACATGAAGATGCTTCTGCTCTCCTATGAAAATGGTGTTACTGATTGCTCTGTGAGATTAGGTCCCTTTAAGTTTAAGATGCAGGAATATAATGGAAGCTTACCTACATTGGCTTTAAATCCACACTCATGGACTAAGATTTCAAGTATAATTTTTGTTGATTTGCCTGCAAATACTGGATTCTCCTATGCAAAACCACCCATTGCAACTCAACGTAGTGACTCCAAACAAGTTCAACATGCCGTTCAATTTATTAGGAAGAATTTTTCTCAAACTCTTTCTACGTTGGGAGATTCATATGCTGGGTTGATTGTACCTGCAATTGCTCTTGAAATTGTAAAAGGTTATGAGGTGTCATCTCGTGAGGCAGATTTGAATGTCTGCTACCCACCAGCATTGGCAATGGAATGTTTTAACAAGAGTTATGGAGAACTGCTAATCACTTATTGGGTCAATGATGATGTGGTTCGCAGGGCTCTTGGCATCCGTCAGGGAAGTATAGGACAATGGAAGCGATGTCTGAAAACGCCTTATGCTAAAGATATTGAAAGTAGTTTTCCATTTCATGTGGAGTTGAGTACTAAAGAATATCGTGCTCTGGTATACAGtgGAGATCATGACTTTGTAGTACCATTTTCAGCAACTCAAGCTTGGATAAGATCTCTAAATTACTCCATTGTAGATGAGTGGAGGCCATGGTTAGTCCAAACTCAAATTGCAGGttaCACGAGGATGTATTTAAATGGGATGACGTTTGCCACTGTAAAGGAAGATCCCAAAGGTGAAGTTCACATTGTCGTAGTAAATTCCCTTGTCCTTGTTTCTGTTATCGAACTCCACCATGAAGGCTATGGTGTTGTTGGAAGGGGATTTCAAGGATTCGTTGAGGGAAGGAACGTAAAAGGCACCGATGTAGCATTTGGGCTCGGAGCAGGGCATACAGCTCCAGAGTACAAAAGCAAAGAATGCTTTGCAATGTTTGAAAGGGATTTCTCAGAAccattgtaa 1011 0.4026 MHMKMLLLSYENGVTDCSVRLGPFKFKMQEYNGSLPTLALNPHSWTKISSIIFVDLPANTGFSYAKPPIATQRSDSKQVQHAVQFIRKNFSQTLSTLGDSYAGLIVPAIALEIVKGYEVSSREADLNVCYPPALAMECFNKSYGELLITYWVNDDVVRRALGIRQGSIGQWKRCLKTPYAKDIESSFPFHVELSTKEYRALVYSGDHDFVVPFSATQAWIRSLNYSIVDEWRPWLVQTQIAGYTRMYLNGMTFATVKEDPKGEVHIVVVNSLVLVSVIELHHEGYGVVGRGFQGFVEGRNVKGTDVAFGLGAGHTAPEYKSKECFAMFERDFSEPL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0803 336 PRINTS Carboxypeptidase C serine protease (S10) family signature 41 53 IPR001563 GO:0004185|GO:0006508
Sto10g0803 336 PRINTS Carboxypeptidase C serine protease (S10) family signature 54 64 IPR001563 GO:0004185|GO:0006508
Sto10g0803 336 PRINTS Carboxypeptidase C serine protease (S10) family signature 82 107 IPR001563 GO:0004185|GO:0006508
Sto10g0803 336 PRINTS Carboxypeptidase C serine protease (S10) family signature 304 317 IPR001563 GO:0004185|GO:0006508
Sto10g0803 336 PANTHER CARBOXYPEPTIDASE, PUTATIVE-RELATED 133 259 - -
Sto10g0803 336 PANTHER CARBOXYPEPTIDASE, PUTATIVE-RELATED 14 120 - -
Sto10g0803 336 SUPERFAMILY alpha/beta-Hydrolases 20 257 IPR029058 -
Sto10g0803 336 Gene3D alpha/beta hydrolase 5 129 IPR029058 -
Sto10g0803 336 Pfam Serine carboxypeptidase 143 258 IPR001563 GO:0004185|GO:0006508
Sto10g0803 336 Pfam Serine carboxypeptidase 21 120 IPR001563 GO:0004185|GO:0006508
Sto10g0803 336 Gene3D - 136 335 - -
Sto10g0803 336 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 133 259 IPR001563 GO:0004185|GO:0006508
Sto10g0803 336 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 14 120 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0803 Sto-Chr10 7535646 7545186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0803 147 257 Calmodulin-binding Proteins AT2G22960 58.929 4.77e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0803 K16296 - gmx:100801015 257.684