Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0783 ATGGGAGTGGCAGTGGCCGGAGTCGATCCGCTCACTGAAAAAGCGGCCAAGATGAGAGAGTCGCTTCAGAAAAGCCAGACCATCACCGACGACGTCGTTTCCATTCTCGGTTCCTTTGACCACCGTCTCTCCGCCCTTGAAACCGCCATGCGTCCCACTCAGATTAGAACGCATTCTATTCGGAAGGCTCATGAGAATATTGACAAGACGTTGAAGGCTGCGGAGGTCATATTGGTTCACTTCGATCAATATCGTCAGGCAGAGGCAAAAATACTTAAAGGTCCACATGACGACTTGGAGAATTATCTTGAAGCAATTGATCAACTGAGAAGCAACATTCAGTTTTTTGGTAGTAACAAGGGCTTTAAGAGTGGTGATAGTGTCGTTAACCATGCCAACAATTTAATAGCTAAAGCTATTTCTAAGCTAGAAGATGAGTTTAAGCAGCTATTATCGTCTTACAGCCAACCCGTGGAACCTGAGCGCCTCTTCGATTGTCTTCCAAACTCAATGCGGCCTTCCTCGGGATCACCTGGCAATGAAGGTGATTCTACTGGAAAGAAGCCTTCCTCCAATCACCATTCTGAGTCACAAAACAGTAACATTGATGCCGTTGTGTACACACCTCCTGCTCTTATACCACCAAGGATTTTGCCACTGCTTCATGACTTAACAAAGCAAATGGTTCAAGCTGGTCACCAACAACAGTTAGCCAAAATATACAGGGATACCCGCTCTAATGTATTAGAAGAAAGCTTACACAAACTGGGAGTTGAGAAACTGAGCAAAGATGACGTTCAAAAGCTACAATGGGAGATTTTGGAGGCTAAAATTGGAAACTGGATTCACTTCATGCGTATAGCTGTCAAATTGTTGTTTGCCGGTGAGCGAAAAGTTTGTGATCAAATATTTGAAGGATTTGATTCACTTAGTGATCAGTGTTTTGCTGAGGTGACTAAAAATAGTGTCTCCATGCTACTTAGTTTTGGAGAAGCAATTGCCAGAAGCAAGAGATCACCAGAAAAGTTATTTGTACTTTTGGACATGTATGAAATAATGCAAGAGCTCCGTTCAGAGATTGAAACACTGTTCAAAGGTAAATCTTGCAATGAAATTAGAGAAGCTGCATTGGGTTTGACAAAACGGCTTGCACAAACAGCCCAGGAGACATTTGGAGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAAACTGCTGTAACAGATGGAACTGTCCATCCTTTGACAAGCTACGTAATTAACTATGTGAAGTTTTTATTTGACTACCGGTCCACGTTGAAGCAACTCTTCCAAGAATTTGCCAACGGAGATGATACTTCGCAGCTAGCAACTGTAACGATGCAGATAATGCAAGCTCTTCAAACCAATTTAGATGGAAAATCGAAGCAGTATAAAGACCCTGCTTTGACACATCTATTTCTCATGAATAATATTCATTATATTGTCCGATCAGTACGAAGGTTCAAGACCTTCAATATTATGTTTGAGGAAATTCATCAAAAACAATCTCAGTGGACAGTTCCTGACACAGAGCTGCGAGAGTCTCTTAGGCTCGCCGTTGCTGAAGTCTTGTTGCCTGCCTATCGATCATTCGTGAAACGCTTTGGGCCTCTAGTAGAGAATGTGAAGAATTCCCAGAAATTCATCAAATATACAGCAGAAGATCTTGAGAGAATGCTGGGCGAATTTTTTGAAGGAAAAAGCATAAATGAAACGAAGCGCGGCGATTTTAACGGCCGCTAA 1764 0.4223 MGVAVAGVDPLTEKAAKMRESLQKSQTITDDVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEVILVHFDQYRQAEAKILKGPHDDLENYLEAIDQLRSNIQFFGSNKGFKSGDSVVNHANNLIAKAISKLEDEFKQLLSSYSQPVEPERLFDCLPNSMRPSSGSPGNEGDSTGKKPSSNHHSESQNSNIDAVVYTPPALIPPRILPLLHDLTKQMVQAGHQQQLAKIYRDTRSNVLEESLHKLGVEKLSKDDVQKLQWEILEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSDQCFAEVTKNSVSMLLSFGEAIARSKRSPEKLFVLLDMYEIMQELRSEIETLFKGKSCNEIREAALGLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFANGDDTSQLATVTMQIMQALQTNLDGKSKQYKDPALTHLFLMNNIHYIVRSVRRFKTFNIMFEEIHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSFVKRFGPLVENVKNSQKFIKYTAEDLERMLGEFFEGKSINETKRGDFNGR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0783 587 SUPERFAMILY Cullin repeat-like 80 572 IPR016159 -
Sto10g0783 587 MobiDBLite consensus disorder prediction 164 200 - -
Sto10g0783 587 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 36 494 - -
Sto10g0783 587 PANTHER EXOCYST COMPLEX COMPONENT EXO70A1-LIKE 494 577 - -
Sto10g0783 587 MobiDBLite consensus disorder prediction 170 200 - -
Sto10g0783 587 Gene3D Exocyst complex component Exo70 495 575 - -
Sto10g0783 587 PANTHER EXOCYST COMPLEX PROTEIN EXO70 36 494 IPR004140 GO:0000145|GO:0006887
Sto10g0783 587 PANTHER EXOCYST COMPLEX PROTEIN EXO70 494 577 IPR004140 GO:0000145|GO:0006887
Sto10g0783 587 Pfam Exo70 exocyst complex subunit 280 494 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sto10g0783 587 Gene3D Exocyst complex component Exo70 75 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0783 Sto-Chr10 7212185 7227860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0783 494 581 EXO70 exocyst subunit family AT5G03540 81.818 3.05e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0783 K07195 - gmx:100813987 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0783 10 7212185 7227860 Sto10g0783 10 7212185 7227860 ECH