Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0740 ATGCCaacaagaacaaaaaaagacaaaacaaCAATAACTTCTTGTCGATTTGTTTGTTGTAAAGAAGGGCTAAGAGTAAAAGATAAGAGAGATTATTTGACAGTTAATCCTCGACAAGAGACGAGAACAGATTGCAAAGCAAAAATATCCCTCGTCCTTCAAGATGGGAAGTTGAGAGTGAAGGAATTTGTAGAAGAGCATAATCATGTACTCCATACTATGCAAACTGCACACATGCTAGCTTCTCAACGGCACGTGTCTGAAATCCAAGCTCATGAAATTGAGTTGGCTAATGATTCTGGGATTCAACAAAGAGCCTCTTTTACACTGGCGAGCATGCATGTTGGGGGACGAGATAATCTAGGATACACACGTTTGGATCAGAAGAATTATCTTCGCACTCGACGACAAAATAGTATGAAGTATGGGGAAGCAGGCAGTTTATTGGGTTATTTCCAAGATCAAATATCGTCAAATCCATCATTCTTTCATGCATTTCAGATGGACTCAGAGGAACaaataacaaacatattttGGGCCGATGCAAGAATGCAACTAGATTACGGTTACTTTGGTGATGTTATCTCTCTTGACACAACATACTGCACTAACAATGCAcataggccacttgccttgttttcaggatttaatcATCATAGAGGAGTGGTTATTTTTGGGGCTGCATTGTTATATGATGAGACGACAGCATCATTCAATTGGCTATTTGAGACATTCTTAAAGGCACATAATCAAAAAAAGCCTCTGACCATGTTCACCGATCAGGATCAAGCAATGGCCAAAGCCATACAAGAGGTGTTTCCTAACACATGCCACGGATTATGCACATGGCATTTGATGCAGAACGGCATCAAGCACTTAGGAAACTTGATGAAGAATGGATCTCACTTCTTACAAGACTTCAAAGCTTGTATGTATAGATATGAGGAAGAGACAGAGTTTGAAGCAGCTTGGAGTAAAATACTCTTAGATTATAATGTCCATGAAAACACATGGATAAGATCAATCTATTCCTTGAAGGAAAAGTGGGCAGCTTGTTATATGAAGAGATTTCTTACATTAGGCATGCGGAGCACACAACTTAGTGAGAGTTTGAATGCAGACGTCAAAAGGTGCTTGAAACCGGATGTCGATATTCTTCAATTCTTCAAACACTTTGAACTAGTGGTTGAGGACAAAAGATATAATGAATTGAAGTGTGAATTTGAGGCAAGAGAAAAGGTGCCAAGATTGAGATATCCAAGCTCACCTATGATCCAACAACTTGCAAAAGTGTACACTCCTACCATCTTTGAAATGTTCCAAGATCAAATTGACTTGTTTTTTACTTGTTGTGTAAAGCAAAGAAGAGAAAGTGAGTCATTGATTGAATATGTCATTAATATGCTTAATCACAAAGGAGAGTGGAAAGTTTTGTTTTATCCACAGGAGAAGTCAATTTCTTGCACTTGTAGGAAGTTTGAGAACTTTGGTATTTTGTGTTGTCATGCTGTGAAAGCGTTTGAAGCCAACGATGTCAAGGAAGTTCCTGatcaatatattttgaaaaggtGGTCAAAAAATGCCAGAATTGGTGTTATATTTGATGTCAATGGGAGAGAAGTTGAGGAAGACCCAAAATTGGTTCGTACGCTTCAATATAAATCCCTTTGCAAAATTATGATCAAGCTAGCTTCCGATGTCTCGGGTAATCATGAAGAGGTCTCTTTAGTTCAATCAGGTATTGATGAACTGATCAATAAAGTCATGACACTTCGTTTAGGGACAATTACAACCAACCGGCATCAAAAAGAGACTTCTTTAGTTCATTCAAGTACAAATGATACTATAACACCTAGTAGCATTGACACATTACAACCAACCGGCATAAAAAAGAGGCAAGGACGTAAGAGTAGTAAGCGTTTGAAGAGTAGTGTTGAGGTCCGACTTTCAAGGACATCTTCAAAACCAACCGTAAAAAATTCCCAAAGTGAACAATCCACAGACATTGGAGCTCAAAGTCAAGTTCAATTTGAAAATCCATTTAGTTTTACCAAATTTTCCAGTGACATACTTCCTGATATGTTCTCTCACAAACCTCTCATACAAGAATGCTGCCCCTTTGAACTGAAGCAGAACCAGCCATGCCACCACACTAGCTTCACATCGTACCATATTGGCATCCACTCTAGAAGTGGCTGTACAACCATTTCTGTTCCAACTGCTCCAACGACATCTCAGGCTGCCACTCCTGGAGAACAAGAAGGGATTGTTGCTGAACCGCCCACAGGCCATTAG 2295 0.38 MPTRTKKDKTTITSCRFVCCKEGLRVKDKRDYLTVNPRQETRTDCKAKISLVLQDGKLRVKEFVEEHNHVLHTMQTAHMLASQRHVSEIQAHEIELANDSGIQQRASFTLASMHVGGRDNLGYTRLDQKNYLRTRRQNSMKYGEAGSLLGYFQDQISSNPSFFHAFQMDSEEQITNIFWADARMQLDYGYFGDVISLDTTYCTNNAHRPLALFSGFNHHRGVVIFGAALLYDETTASFNWLFETFLKAHNQKKPLTMFTDQDQAMAKAIQEVFPNTCHGLCTWHLMQNGIKHLGNLMKNGSHFLQDFKACMYRYEEETEFEAAWSKILLDYNVHENTWIRSIYSLKEKWAACYMKRFLTLGMRSTQLSESLNADVKRCLKPDVDILQFFKHFELVVEDKRYNELKCEFEAREKVPRLRYPSSPMIQQLAKVYTPTIFEMFQDQIDLFFTCCVKQRRESESLIEYVINMLNHKGEWKVLFYPQEKSISCTCRKFENFGILCCHAVKAFEANDVKEVPDQYILKRWSKNARIGVIFDVNGREVEEDPKLVRTLQYKSLCKIMIKLASDVSGNHEEVSLVQSGIDELINKVMTLRLGTITTNRHQKETSLVHSSTNDTITPSSIDTLQPTGIKKRQGRKSSKRLKSSVEVRLSRTSSKPTVKNSQSEQSTDIGAQSQVQFENPFSFTKFSSDILPDMFSHKPLIQECCPFELKQNQPCHHTSFTSYHIGIHSRSGCTTISVPTAPTTSQAATPGEQEGIVAEPPTGH 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0740 764 MobiDBLite consensus disorder prediction 602 631 - -
Sto10g0740 764 Pfam MULE transposase domain 194 288 IPR018289 -
Sto10g0740 764 MobiDBLite consensus disorder prediction 602 673 - -
Sto10g0740 764 MobiDBLite consensus disorder prediction 647 673 - -
Sto10g0740 764 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 6 597 IPR031052 GO:0006355
Sto10g0740 764 MobiDBLite consensus disorder prediction 739 764 - -
Sto10g0740 764 Pfam SWIM zinc finger 482 509 IPR007527 GO:0008270
Sto10g0740 764 SMART 26again6 486 513 IPR006564 GO:0008270
Sto10g0740 764 PANTHER OS03G0181600 PROTEIN 6 597 - -
Sto10g0740 764 ProSiteProfiles Zinc finger SWIM-type profile. 475 511 IPR007527 GO:0008270
Sto10g0740 764 Pfam FAR1 DNA-binding domain 4 72 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0740 Sto-Chr10 6783579 6789680 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sto10g0740 MULE 1.2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0740 - - ahf:112709060 725.317