Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0716 ATGGCGGCTTCTCTCATCCGTCTTCACTTCCATGATTGCTTTGTTCATGGCTGTGATGCATCAATTTTACTTGATGATAGTTCTGCTTTTGAAAGTGAAAAGACTGCACGTCCTAATGAAAATTCTGTCAGAGGATATAACGTTATTGATCAAGCCAAGGCTAAAGTCGAAAAGATATGCCCTGGAGTTGTCTCATGTGCTGATATCTTAGCCGTGGCAGCAAGAGATTCATCATTTTCTgtCGGTGGTCCATCATGGACTGTGAAGCTTGGACGTAGAGATTCTACAGCAGCATACAAGGATATAGCTAACAGTGATCTTCCAAGTTTCAGAGATAGTCTTCAAGTCCTAATATCCCGTTTTAATACAAAAGGACTTAGTCCAAGAGACATGGTTGCCCTATCTGGACAAGCCCAATGCTTCACATTTCGCGATAGGATATACAACAATAGTAACGATGACATAGATGTTGGATTTGCTGCCACTCGCCAAAAAACTTGTCCATTAGCAAGTAGCCCTACTAATGACGAGAAGTTGGCTCCTCTTGAACTGGTCACACCTAACTCATTTGACAACAATtactttaaaaacttgattcgAAAGAAGGGTCTTCTTCCTTCTGATCAAGTCCTTTTCAGTGGAGGATCTACAGACAATATTGTGTTAGAATACAGTAAACACTCAGCAACTTTTAAATCTGACTTCGCCTTTGCCATGATTAAGATGGGAGATATTGAACCTTTAATTGGGTCAGCTGGAATAGTAAGAAGGATTTGCAGTGCtatataa 789 0.3954 MAASLIRLHFHDCFVHGCDASILLDDSSAFESEKTARPNENSVRGYNVIDQAKAKVEKICPGVVSCADILAVAARDSSFSVGGPSWTVKLGRRDSTAAYKDIANSDLPSFRDSLQVLISRFNTKGLSPRDMVALSGQAQCFTFRDRIYNNSNDDIDVGFAATRQKTCPLASSPTNDEKLAPLELVTPNSFDNNYFKNLIRKKGLLPSDQVLFSGGSTDNIVLEYSKHSATFKSDFAFAMIKMGDIEPLIGSAGIVRRICSAI 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0716 262 Gene3D Peroxidase, domain 2 108 242 - -
Sto10g0716 262 PANTHER PEROXIDASE 1 261 - -
Sto10g0716 262 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 PRINTS Plant peroxidase signature 197 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 PRINTS Plant peroxidase signature 237 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 SUPERFAMILY Heme-dependent peroxidases 1 261 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 CDD secretory_peroxidase 1 262 IPR033905 GO:0004601|GO:0042744
Sto10g0716 262 Gene3D - 1 260 - -
Sto10g0716 262 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 ProSiteProfiles Plant heme peroxidase family profile. 1 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 Pfam Peroxidase 1 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 PANTHER PEROXIDASE 72-RELATED 1 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sto10g0716 262 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0716 Sto-Chr10 6542365 6543577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0716 1 262 Peroxidase AT1G14550 65.056 1.22e-122 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0716 K00430 - gmx:100786161 402.905