Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0685 TTGCATCACGCGCTTGACCTCGGTGATGGCGACGCCGGTCTTGACTCTCGCTCTCTTCCTTTTGTGCTGTCGTTTAACAATCTCACTTACAGCGTCAAGGTCCGCCGGAAAATGAGCTTCTCGGCGTTGCTTCCGCGGCGGAGAAACCGGCTCGGAGCCGCCGCGAGCACGAAGACCTTGCTGGACGACATCTCCGGCGAGGCCCGCGACGGCGAGATCGTGGCGGTGATGGGAGCCAGTGGATCCGGCAAGTCGACTCTCATCGATGCGCTGGCGAATCGAATCGCGAAGGGAAGCTTGAAAGGGAGCGTGACGTTGAACGGCGAGGCGATGAACTCGAGGCTTCTGAAGGTGATTTCGGCGTACGTAATGCAAGACGATCTGTTATTCCCAATGCTCACCGTCGAAGAGACTCTCATGTTCGCCGCCGACTTCAGATTGCCTCGCACTCTCTCcaaatccaagaagaagatgCGAGTCCAAGCTCTGATCGACCAGCTCGGCCTCCGGAACGCCGCCAACACCGTCATCGGCGACGAAGGCCACCGCGGAGTCTCCGGCGGAGAACGACGGCGCGTGTCGATCGGCATCGACATAATCCACGACCCGATCATCTTGTTCCTGGACGAGCCAACCTCGGGACTGGACTCCACGAGCGCGTTCATGGTGGTGAAGGTGTTACAGAGAATCGCACAGAGCGGAAGCATCGTCATAATGTCCATTCATCAGCCGAGTTACCGAATACTCGGACTCCTCGACACAATGATTTTCCTATCGCGCGGGAAAACGGTGTACAGCGGTTCGCCGATGCAGCTTCCGACGTTCTTCGCCGAGTTTGGATATCCGATTCCGGAAAACGAGAACAAAACAGAGTTCGCTTTGGATCTGATTCGAGAACTGGAAGGGTCTCCTGGTGGTACCAAGAGCTTAGTGGAGTTCAACAAATCATGGCGGAACAAGAAAGATATTGTTGAAACCAAAAGCAGTTATGAAACGCATGGTTTATCTTTGAAAGAAGCAATCAGCGCAAGCATCTCCAAAGGGAAATTAGTATCCGGCGCTACGAATACTACAAACACAAGTTCTTCTTCCACATGGATGGTGCCGACATTTGCGAATCCATTTTGGGTTGAAATGGCGACACTCTCGAAACGATCTTTCAAAAACTCACGGCGAATGCCAGAGCTATTGGGGATGAGAATGAGCACCGTATTGATCACAGGCTTCATATTAGCCACAATGTTCTGGCAATTAGACAATTCCCCGAAAGGCGTCCAAGAGAGACTGGGCTTCTTCGCCTTCGCCATGTCCACAACCTTCTACACAACCGCAGACGCACTCCCTGTGTTCCTCCAAGAGCGTTACATCTTCATGAGAGAAACCTCCCACAACGCCTACCGCAGATCCTCCTACCTCGTTTCTCACGCCCTCGTCGCTCTTCCCGCCTTGATCTTCCTCTCCTTAGCCTTCGCCGCCGCCACGTTTTGGGCCGTGGGCCTGGACGGCGGCTTCCAGGGCTTCCTCTTCTACTGCCTCATCATCCTCGCTTCCTTCTGGGCCGGAAACTCCTTCGTCACCTTCCTTTCGGGTCTCGTCCCTCACGTGATGTTGGGATACACCATAGTGGTAGCCATCTTGGCCTATTTCCTACTCTTCAGTGGCTTCTTCATAAACCGAGATCGCATCCCTTCCTACTGGATATGGTTCCACTACATTTCTCTGGTGAAGTATCCGTACGAGGCGGTTTTGCAGAACGAGTTCGATGATCCGTTGAAGTGCTTTGTGAAGGGAGTTCAGATATTCGATAACACGCCGTTGGGTTCGGTGCCGGAAGTGATGAAGTTGAAGCTGTTGAAGAGTATGAGTGAGACGTTGGGAGTGAACATCACGAGCTCGACGTGCTTAACGACGGGTTCGGATATATTGCAGCAAAATGGGGTAACGGATTTGAGTAAGTGGAATTGCTTGTGGGTCACTGTGGCTTGGGGTTTCTTCTTTAGGATTCTCTTTTACTTGTCGTTGCTGTTGGGTAGTAAGAACAAGAGGAGGTAA 2052 0.5234 LHHALDLGDGDAGLDSRSLPFVLSFNNLTYSVKVRRKMSFSALLPRRRNRLGAAASTKTLLDDISGEARDGEIVAVMGASGSGKSTLIDALANRIAKGSLKGSVTLNGEAMNSRLLKVISAYVMQDDLLFPMLTVEETLMFAADFRLPRTLSKSKKKMRVQALIDQLGLRNAANTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSIHQPSYRILGLLDTMIFLSRGKTVYSGSPMQLPTFFAEFGYPIPENENKTEFALDLIRELEGSPGGTKSLVEFNKSWRNKKDIVETKSSYETHGLSLKEAISASISKGKLVSGATNTTNTSSSSTWMVPTFANPFWVEMATLSKRSFKNSRRMPELLGMRMSTVLITGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETSHNAYRRSSYLVSHALVALPALIFLSLAFAAATFWAVGLDGGFQGFLFYCLIILASFWAGNSFVTFLSGLVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYISLVKYPYEAVLQNEFDDPLKCFVKGVQIFDNTPLGSVPEVMKLKLLKSMSETLGVNITSSTCLTTGSDILQQNGVTDLSKWNCLWVTVAWGFFFRILFYLSLLLGSKNKRR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0685 683 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524
Sto10g0685 683 Pfam ABC-2 type transporter 242 301 IPR043926 GO:0140359
Sto10g0685 683 Pfam ABC-2 type transporter 380 587 IPR013525 GO:0016020|GO:0140359
Sto10g0685 683 SMART AAA_5 70 262 IPR003593 -
Sto10g0685 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 676 - -
Sto10g0685 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 276 IPR027417 -
Sto10g0685 683 CDD ABCG_EPDR 22 267 - -
Sto10g0685 683 Pfam ABC transporter 61 213 IPR003439 GO:0005524
Sto10g0685 683 Gene3D - 49 276 IPR027417 -
Sto10g0685 683 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 285 IPR003439 GO:0005524
Sto10g0685 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 16 8 676 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0685 Sto-Chr10 6082595 6084682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0685 63 272 Calmodulin-binding Proteins AT2G36910 28.571 2.12e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0685 K05681 - gmx:100803658 1096.26