Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0662 ATGGTGGCGTACGAGTGTTTCAAGCCGCCCGAGGACACGCGGCTCGACACGGACTCGGCCGCGAGGATCGTGCTACGAAACAGGAGGCTCGGGCTCGAGGAGTATAGGTTTATCCTGAAGACGATTGTGAGTTCCGGGATAGGGGAGAGTACGTACTGCCCGAGGAATGTGATCGAAGGGAGGGAGCATTGCCCTACGTTGGAGGATTCGTATAAGGAGATCGATGAGATCGTGTTCGATACGCTCGATGGGCTTTTCGCTAAGACGGGCTTCGGGCCGTCGGAGATTGATGTTCTCGTGGTTAATGTTTCGTTGTTCTCTCCCGCGCCCTCTCTCACCGCTCGTATTATtaacagGTACAAAATGAGGGACGACATAAAGGCGTACAATTTGGCGGGAATGGGGTGTTCGGCGAGCGTGGTGGCGATCGACGTGGTGCAGCAAATACTGAAGGTTCGGAAGAACTCGCTCGCCGTAGTCGTGAGCACCGAGGATCTCGGCGCGCATTGGTATAGTGGGAAGGACAGAATGATGATGCTATCGAACTGTCTCTTCCGGTCAGGTGGGTGTTCCATGCTCTTCACCAACAAGCCGGCGCTGAAGCACCGAGCCATCTTGAAGCTCAAGCACATGGAGCGAACCCAATTCGGTGCAAATGATGACGCCTACCGGTGCTGCATGCAGGTGGAAGACGACGAAGGAGAACGCGGCTTCCGCCTCACAAAAGGCCTAGTAAAGGCGGCTGGTCAAGCCCTAACACTGAACCTACAAATAATGGCACCCAAGATCCTCCCTCTGTGGGAGCTCGTACGCTTCTTCACAGCCTCGTTACGACACTCCAAAATGAccaaaaaggccctcaccctcAATGTCCTAGCCTCACCCTCATGCGGGTCCTTGAGGCTCAACTTCAAGTCAGGAATAGACCACTTCTGTGTGCACCCGGGGGGCAGGGCCGTAATTGACGGTGTGGCCCTAGGGCTCGGCCTCTCCGAGTACGACATCGAGCCCGCCAGAATGGCCCTACACCGGTGGGGCAATACCTCCGCCGGAGGACTATGGTATGTGTTAGGGTACATGGAGGCCAAAAAGAGGCTCAAGAAGGGACATAGGATCCTAATGATAAGCCTTGGGGCTGGGTTTAAGTGTAACAATTGTGTGTGGGAGGTCATGAAGGATTTGGAGGACCCTAATGTGTGGAAAGATTGCATTGAAAGTTACCCACCAAAGTCACTCAAGAATCCCTTTGAAGAGAAGTATGGTTGGATCCATGATCAGTGCCTTAGCTTTGTGAGCTGTCTCTCGGGAAGTCGAAATGGAAAGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAGAGGTCTTCAATGGAGGATTTCTATGAGACAAGTATATCAGAGGTTGATGGGCAAATGGTTGCCTTTTTTGGTGTTTTTGATGGTCATGGAGGTTCTCGGACTGCTGAATACCTGAAGAAAAATCTTTTCAAGAATATTAGTAGTCAtcctgaatttatcaaagacACGAAGACTGCACTTGTTGAAGCTTTTAAACAGACAGATGTTGATTACCTTAAAGAGGAAAAGGGTTATCATAGGGATGCTGGGTCCACTGCTTCAACTGCTATGTTGTTGGGAGATCGAATTCTTGTTGCTAATGTTGGTGATTCCAGAGTAGTTGCTTCTAGAGCTGGTTCAGTTGTTCCTTTGTCTATTGATCACAAACCTGATAGATCTGATGAACGTCAAAGGATTGAACAGGCTGGGGGGTTCATCATTTGGGCAGCACAACTTCACTTCATTGATAACAATGAACTGCTCACTGCCCTGCTTATCTTACCAGGCACATGGCGAGTTGGTGGTGTCCTTGCTGTTTCCCGTGCATTTGGTGATAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGAAGAAGAGATTGATGGTGTAGATTTTATAATAATAGCTAGTGATGGACTTTGGAATGTCATATCTAACAAGCCCGAAAACTCAAGCAGTACACTAGTTTACAGGTTGAGTAAGCTATTTGGGTCTGTTTCCACAAATATGCGATTTGCATTCAACTATGTCAGATATTACCAGCTTAGTTTTCCCCTTAACAGCATATATTACTACAGTCTACTGTACAACCACATTGGTAAGAAACTTAGAGAAGAATCACAATACTTGAATCATGTTGCTAGCCGGAAACCACCACATACAGCCACAGTGCAACCTGCTGAGATTGGGGACGGCTTTTGTGATGAAGCTGTGTCATTGGTACAAAATATCACAGATGCAGAAGTGGCATCCAGAGAACTTATCAAAGAAGCTTACAAACGAGGAAGCTCTGACAACATTACTTGCGTTGTTGTTCGGTTTGATCTATCTTGA 2397 0.4718 MVAYECFKPPEDTRLDTDSAARIVLRNRRLGLEEYRFILKTIVSSGIGESTYCPRNVIEGREHCPTLEDSYKEIDEIVFDTLDGLFAKTGFGPSEIDVLVVNVSLFSPAPSLTARIINRYKMRDDIKAYNLAGMGCSASVVAIDVVQQILKVRKNSLAVVVSTEDLGAHWYSGKDRMMMLSNCLFRSGGCSMLFTNKPALKHRAILKLKHMERTQFGANDDAYRCCMQVEDDEGERGFRLTKGLVKAAGQALTLNLQIMAPKILPLWELVRFFTASLRHSKMTKKALTLNVLASPSCGSLRLNFKSGIDHFCVHPGGRAVIDGVALGLGLSEYDIEPARMALHRWGNTSAGGLWYVLGYMEAKKRLKKGHRILMISLGAGFKCNNCVWEVMKDLEDPNVWKDCIESYPPKSLKNPFEEKYGWIHDQCLSFVSCLSGSRNGKFSYGYSSFKGKRSSMEDFYETSISEVDGQMVAFFGVFDGHGGSRTAEYLKKNLFKNISSHPEFIKDTKTALVEAFKQTDVDYLKEEKGYHRDAGSTASTAMLLGDRILVANVGDSRVVASRAGSVVPLSIDHKPDRSDERQRIEQAGGFIIWAAQLHFIDNNELLTALLILPGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKPENSSSTLVYRLSKLFGSVSTNMRFAFNYVRYYQLSFPLNSIYYYSLLYNHIGKKLREESQYLNHVASRKPPHTATVQPAEIGDGFCDEAVSLVQNITDAEVASRELIKEAYKRGSSDNITCVVVRFDLS 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0662 798 SUPERFAMILY PP2C-like 428 668 IPR036457 -
Sto10g0662 798 Gene3D - 40 390 IPR016039 GO:0016746
Sto10g0662 798 PANTHER 3-KETOACYL-COA SYNTHASE 19 1 429 - -
Sto10g0662 798 Pfam Protein phosphatase 2C 444 668 IPR001932 -
Sto10g0662 798 Gene3D - 751 796 IPR036457 -
Sto10g0662 798 CDD CHS_like 28 388 - -
Sto10g0662 798 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 306 389 IPR013747 -
Sto10g0662 798 Pfam FAE1/Type III polyketide synthase-like protein 1 276 IPR013601 GO:0006633|GO:0016020|GO:0016747
Sto10g0662 798 SMART PP2C_4 433 793 IPR001932 -
Sto10g0662 798 Gene3D - 435 672 IPR036457 -
Sto10g0662 798 SUPERFAMILY Thiolase-like 2 201 IPR016039 GO:0016746
Sto10g0662 798 PANTHER 3-KETOACYL-COA SYNTHASE 1 429 IPR012392 GO:0006633|GO:0016020|GO:0016747
Sto10g0662 798 SUPERFAMILY Thiolase-like 210 390 IPR016039 GO:0016746
Sto10g0662 798 CDD PP2Cc 442 795 IPR001932 -
Sto10g0662 798 ProSitePatterns PPM-type phosphatase domain signature. 474 482 IPR000222 GO:0043169
Sto10g0662 798 SUPERFAMILY PP2C-like 756 796 IPR036457 -
Sto10g0662 798 ProSiteProfiles PPM-type phosphatase domain profile. 443 795 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0662 Sto-Chr10 5779705 5802552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0662 1 431 Acyl Lipid Metabolism Gene Families AT5G04530 59.770 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0662 K15397 - gmx:100777403 694.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0662 10 5779705 5802552 Sto5g1714 5 12260226 12276921 ECH
Sto10g0662 10 5779705 5802552 Sto10g0662 10 5779705 5802552 ECH