Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0643 ATGATGATATCGAGGGGGCTGTTCGGGTGGTCCCCACCCCACATACAGCCGCTGACGCCGGTGTCGGAGGTCTCTGAGCCGCCGGAGTCGCCGTCGCCGTACTTAGACCCCGGAGCCGAGACTTCTGCCTCCCACCAGGTTGAAGTCGAGGAGGAGATGGAGGAGCCCGAGGAGATTGAGCCGCCGCCCGCTGCAGTTCCCTTCTCCGGCCTCTTTGCTTGCTCTGACCGGCTCGATTGGGTTCTGATGGTTGTTGGTTCGCTCGCAGCTGCTGCTCATGGAACGGCTCTCGTAGTTTACTTGCACTACTTTGCAAAGATCATTCAGGTGCTGAGGATGGATCAATCGGAGGATCAATTTCGCAGGTTCACGGAGCTTGCTTTAACCATTGTCTATATTGCTGCGGGCGTTTTTGCTGCTGGATGGATTGAGGTTTCATGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTTATTCGGTCAAAATATGTTCAAGTATTGCTTAACCAAGATATGAGTTTTTTTGATACTTATGGGAACAATGGAGACATTGTGAGTCAAGTATTAAGTGATGTGCTGCTTATTCAGTCTGCACTCAGTGAAAAAGTTGGAAATTATATTCATAATATGGCTACATTCTTCAGTGGACTTGTTATTGGATTTATCAACTGTTGGCAGATTGCATTGATAACATTAGCCACAGGTCCATTTATTGTTGCTGCAGGAGGAATATCAAATATATTCCTTCATAGGCTTGCAGAAAATATCCAAGATGCATATGCTGAAGCGGCTAGCATTGCTGAACAGGCAGTTTCCTATATCAGGACATTGTATGCATTTACTAATGAAACATTGGCCAAGTATTCATATGCGACATCACTTCAAGCTACCCTTAGATATGGTATCTTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACGTATGGGCTTGCAATATGTTCCTGTGCATTACAACTCTGGGTAGGAAGGTTCTTGGTTATGCATGGAAAAGCTCATGGTGGTGAAATCATAACAGCTCTCTTTGCTGTAATTTTAAGTGGCCTGGGATTGAATCAAGCAGCAACAAATTTCTATTCATTTGATCAAGGACGTATAGCTGCTTATAGATTGTTTGAGATGATAAGCAGGTCATCCTCGTCTGTTAATCAGGATGGAACTGCACCAGTTTCAGTGCAAGGAAATATAGAGTTTCGGAATGTTTATTTCAGCTATCTATCTCGTCCTGAAATCCCTATCTTGAGTGGTTTTTATCTTGCTGTGCCTGCTAAGAAAGCCGTAGCACTTGTTGGCAGAAATGGATCTGGAAAAAGTAGTATTATTCCACTTATGGAGCGGTTCTATGATCCTACATTAGGGGAGGTTCTTCTAGATGGTGAGAACATTAAGAATCTGAAACTGGAGTGGTTGAGGAGCCAAATAGGACTAGTCACTCAGGAGCCTGCTTTGCTCAGTTTGAGCATAAGGGACAACATCGCTTATGGGCGGGATGCCACTATGGATCAAATTGAAGAGGCTGCTAAGATAGCTCATGCACATACATTCATCAGCTCATTAGAGAAAGGTTATGACACACAGGTTGGAAGGGCAGGCTTAGCTTTGACAGAAGAACAGAAAATAAAACTTTCTATTGCAAGAGCTGTGCTTTTAAATCCATCCATTCTTTTGCTTGATGAGGTAACTGGTGGACTTGACTTTGAGGCTGAAAGGGCTGTTCAGGAGGCTCTGGATCTTCTTATGTTGGGACGTTCAACAATAATAATTGCTCGAAGGCTTAGTCTTATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAGTTACTTACCCGGGATGGCTTATATGCAGAACTTCTTCGATGCGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAGCTTTCCAAATTGAGAAGGACTCATCAGCAAGTCATAGCTTTAAAGAGCCATCATCCCCAAAAATGATGAAGTCACCTTCCCTTCAAAGAGTTTCTGGTGTATTCCGACCTTCAGATGGCATCTTTAACTCTCAGGAATCTCCAAATGCTCGGAGCCCACCGCCTGAGAAGATGCTAGAAAATGGTCAGTCTATGGATACAGCAGATAAGGAGCCATCTATAAGAAGGCAGGACAGTTTTGAAATGAGACTACCTGAGTTACCCAAGATTGATGTTCATTCTGTGCATCGACAAAAATCAAATGGCTCTGACCCAGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCCAAGAATGAACGCTCCCACTCACAGACTTTTAGTAGACCCCTTAGTCAGTCTGATGATGTTTCAGTGCAAATGAGAGAAGCAAAGAATACACGGCATCGAGAACCCCCATCATTTTGGAGGCTCGCAAAACTTAGTTTTGCAGAATGGCTTTATGCTGTGCTAGGAAGCATAGGTGCTGCCATCTTTGGTTCTTTCAATCCTCTTCTTGCATATGTTATCGGCCTAGTGGTGACAGCTTACTATAAAATTGACGAAGATCATCACTTACGGCAGGAGGTAGACAAGTGGTGCTTGATCATTGCCTGCATGGGCATTGTGACCGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGGGAGAAAATGACAGAGAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAGTTGGATGGTTTGACGAAGAGGAAAATAGTGCTGACAATTTATCCATGCGCTTGGCCAATGATGCTACATTTGTACGAGCTGCTTTCAGTAACCGACTTTCCATATTTATACAGGATAGTGCTGCAGTTATTGTTGCTGTTCTTATTGGTGCATTGCTGCACTGGCGATTGGCACTTGTAGCATTAGCAACCTTTCCCATTCTCTGTGTTTCTGCAATTGCTCAGAAATTGTGGCTTGCTGGATTTTCAAGGGGTATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTCGAAGATGCAGTTAGAAACATTTACACTGTTGTAGCATTTTGTGCTGGTAATAAGGTAATGGAGCTCTATAGGCTGCAGttgaagaaaatatttaagcagAGTTTTCTTCATGGGATGGCCATTGGTTTTGCCTTTGGGTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTTTGCTTTGGTACACTGCACTATGCATAAAGAAAGGTTATACGCAACCGTCTACTGCACTTAAGGAGTACATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCATTTGGATTGGCTCCTTACATACTGAAACGGCGTAAATCTCTCATTTCAGTATTTGATATTATAGATCGTGTGCCTAAAATTGATCCTGATGATAACACAGCATTGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATGTCGACTTCTGTTACCCTTCTCGTCCAGAAGTTTTGGTATTAAGCAATTTTAGTCTCAAAGTGAACGGGGGTCAAACAGTTGCGGTTGTGGGAGTTTCAGGGTCAGGAAAGAGCACTATAATATCCCTGATCGAGAGATTTTATGATCCAGTTGCTGGCCAAGTTTTATTAGATGCTACCATAAGGGAAAACATCATTTATGCAAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCCAATGCTCACCATTTCATAAGTAGTTTGCCTCATGGTTATGACACTCATGTTGGAATGAGGGGTGTTGACTTAACCCCTGGGCAGAAGCAGAGAATTGCAATAGCGAGAGTAGTGCTAAAGAATGCTCCCATCTTGTTGTTGGATGAAGCAAGTTCATCGATTGAATCTGAGTCGAGCAGAGTAGTGCAAGAGGCTCTGGACACTCTTATAATGGGAAACAAGACCACCATCCTAATAGCACATAGGGCTGCAATGATGAGGCATGTCGACAACATCGTCGTGCTTAATGGAGGACGAATAGTAGAGGAAGGAACCCACGATAATTTGGTGGCGAAGAATGGTCTATATGTCCGATTGATGCAACCTCACTTCGGAAAGGCATTGCGTCAGCATCGACTTGTGTAG 4119 0.4336 MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAETSASHQVEVEEEMEEPEEIEPPPAAVPFSGLFACSDRLDWVLMVVGSLAAAAHGTALVVYLHYFAKIIQVLRMDQSEDQFRRFTELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVMHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSVNQDGTAPVSVQGNIEFRNVYFSYLSRPEIPILSGFYLAVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLEKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTRDGLYAELLRCEEAAKLPKRMPVRNYKETAAFQIEKDSSASHSFKEPSSPKMMKSPSLQRVSGVFRPSDGIFNSQESPNARSPPPEKMLENGQSMDTADKEPSIRRQDSFEMRLPELPKIDVHSVHRQKSNGSDPESPVSPLLTSDPKNERSHSQTFSRPLSQSDDVSVQMREAKNTRHREPPSFWRLAKLSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYKIDEDHHLRQEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVLIGALLHWRLALVALATFPILCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTALCIKKGYTQPSTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDRVPKIDPDDNTALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDATIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDNLVAKNGLYVRLMQPHFGKALRQHRLV 1372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0643 1372 MobiDBLite consensus disorder prediction 742 757 - -
Sto10g0643 1372 Pfam ABC transporter transmembrane region 832 1095 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g0643 1372 Pfam ABC transporter transmembrane region 85 353 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g0643 1372 Gene3D - 1140 1366 IPR027417 -
Sto10g0643 1372 Gene3D - 394 646 IPR027417 -
Sto10g0643 1372 PANTHER ABC TRANSPORTER B FAMILY 19 1368 - -
Sto10g0643 1372 MobiDBLite consensus disorder prediction 18 62 - -
Sto10g0643 1372 MobiDBLite consensus disorder prediction 663 730 - -
Sto10g0643 1372 Gene3D ABC transporter type 1, transmembrane domain 796 1138 IPR036640 GO:0005524|GO:0016021
Sto10g0643 1372 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1368 - -
Sto10g0643 1372 SUPERFAMILY ABC transporter transmembrane region 813 1135 IPR036640 GO:0005524|GO:0016021
Sto10g0643 1372 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 403 638 IPR003439 GO:0005524
Sto10g0643 1372 MobiDBLite consensus disorder prediction 742 805 - -
Sto10g0643 1372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1139 1359 IPR027417 -
Sto10g0643 1372 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1150 1360 IPR003439 GO:0005524
Sto10g0643 1372 Coils Coil 249 269 - -
Sto10g0643 1372 SUPERFAMILY ABC transporter transmembrane region 71 378 IPR036640 GO:0005524|GO:0016021
Sto10g0643 1372 MobiDBLite consensus disorder prediction 758 797 - -
Sto10g0643 1372 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 827 1119 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g0643 1372 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 378 - -
Sto10g0643 1372 MobiDBLite consensus disorder prediction 663 683 - -
Sto10g0643 1372 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 370 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g0643 1372 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 637 IPR027417 -
Sto10g0643 1372 CDD ABC_6TM_Pgp_ABCB1_D2_like 816 1133 - -
Sto10g0643 1372 Gene3D ABC transporter type 1, transmembrane domain 62 384 IPR036640 GO:0005524|GO:0016021
Sto10g0643 1372 SMART AAA_5 1177 1337 IPR003593 -
Sto10g0643 1372 SMART AAA_5 430 743 IPR003593 -
Sto10g0643 1372 Pfam ABC transporter 1168 1289 IPR003439 GO:0005524
Sto10g0643 1372 Pfam ABC transporter 425 568 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0643 Sto-Chr10 5576974 5587209 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0643 53 696 Calmodulin-binding Proteins AT2G36910 44.547 2.02e-169 539
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0643 K05658 - gmx:100789116 2393.23