Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sto10g0643 | ATGATGATATCGAGGGGGCTGTTCGGGTGGTCCCCACCCCACATACAGCCGCTGACGCCGGTGTCGGAGGTCTCTGAGCCGCCGGAGTCGCCGTCGCCGTACTTAGACCCCGGAGCCGAGACTTCTGCCTCCCACCAGGTTGAAGTCGAGGAGGAGATGGAGGAGCCCGAGGAGATTGAGCCGCCGCCCGCTGCAGTTCCCTTCTCCGGCCTCTTTGCTTGCTCTGACCGGCTCGATTGGGTTCTGATGGTTGTTGGTTCGCTCGCAGCTGCTGCTCATGGAACGGCTCTCGTAGTTTACTTGCACTACTTTGCAAAGATCATTCAGGTGCTGAGGATGGATCAATCGGAGGATCAATTTCGCAGGTTCACGGAGCTTGCTTTAACCATTGTCTATATTGCTGCGGGCGTTTTTGCTGCTGGATGGATTGAGGTTTCATGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTTATTCGGTCAAAATATGTTCAAGTATTGCTTAACCAAGATATGAGTTTTTTTGATACTTATGGGAACAATGGAGACATTGTGAGTCAAGTATTAAGTGATGTGCTGCTTATTCAGTCTGCACTCAGTGAAAAAGTTGGAAATTATATTCATAATATGGCTACATTCTTCAGTGGACTTGTTATTGGATTTATCAACTGTTGGCAGATTGCATTGATAACATTAGCCACAGGTCCATTTATTGTTGCTGCAGGAGGAATATCAAATATATTCCTTCATAGGCTTGCAGAAAATATCCAAGATGCATATGCTGAAGCGGCTAGCATTGCTGAACAGGCAGTTTCCTATATCAGGACATTGTATGCATTTACTAATGAAACATTGGCCAAGTATTCATATGCGACATCACTTCAAGCTACCCTTAGATATGGTATCTTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACGTATGGGCTTGCAATATGTTCCTGTGCATTACAACTCTGGGTAGGAAGGTTCTTGGTTATGCATGGAAAAGCTCATGGTGGTGAAATCATAACAGCTCTCTTTGCTGTAATTTTAAGTGGCCTGGGATTGAATCAAGCAGCAACAAATTTCTATTCATTTGATCAAGGACGTATAGCTGCTTATAGATTGTTTGAGATGATAAGCAGGTCATCCTCGTCTGTTAATCAGGATGGAACTGCACCAGTTTCAGTGCAAGGAAATATAGAGTTTCGGAATGTTTATTTCAGCTATCTATCTCGTCCTGAAATCCCTATCTTGAGTGGTTTTTATCTTGCTGTGCCTGCTAAGAAAGCCGTAGCACTTGTTGGCAGAAATGGATCTGGAAAAAGTAGTATTATTCCACTTATGGAGCGGTTCTATGATCCTACATTAGGGGAGGTTCTTCTAGATGGTGAGAACATTAAGAATCTGAAACTGGAGTGGTTGAGGAGCCAAATAGGACTAGTCACTCAGGAGCCTGCTTTGCTCAGTTTGAGCATAAGGGACAACATCGCTTATGGGCGGGATGCCACTATGGATCAAATTGAAGAGGCTGCTAAGATAGCTCATGCACATACATTCATCAGCTCATTAGAGAAAGGTTATGACACACAGGTTGGAAGGGCAGGCTTAGCTTTGACAGAAGAACAGAAAATAAAACTTTCTATTGCAAGAGCTGTGCTTTTAAATCCATCCATTCTTTTGCTTGATGAGGTAACTGGTGGACTTGACTTTGAGGCTGAAAGGGCTGTTCAGGAGGCTCTGGATCTTCTTATGTTGGGACGTTCAACAATAATAATTGCTCGAAGGCTTAGTCTTATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCATGATGAGTTACTTACCCGGGATGGCTTATATGCAGAACTTCTTCGATGCGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAGCTTTCCAAATTGAGAAGGACTCATCAGCAAGTCATAGCTTTAAAGAGCCATCATCCCCAAAAATGATGAAGTCACCTTCCCTTCAAAGAGTTTCTGGTGTATTCCGACCTTCAGATGGCATCTTTAACTCTCAGGAATCTCCAAATGCTCGGAGCCCACCGCCTGAGAAGATGCTAGAAAATGGTCAGTCTATGGATACAGCAGATAAGGAGCCATCTATAAGAAGGCAGGACAGTTTTGAAATGAGACTACCTGAGTTACCCAAGATTGATGTTCATTCTGTGCATCGACAAAAATCAAATGGCTCTGACCCAGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCCAAGAATGAACGCTCCCACTCACAGACTTTTAGTAGACCCCTTAGTCAGTCTGATGATGTTTCAGTGCAAATGAGAGAAGCAAAGAATACACGGCATCGAGAACCCCCATCATTTTGGAGGCTCGCAAAACTTAGTTTTGCAGAATGGCTTTATGCTGTGCTAGGAAGCATAGGTGCTGCCATCTTTGGTTCTTTCAATCCTCTTCTTGCATATGTTATCGGCCTAGTGGTGACAGCTTACTATAAAATTGACGAAGATCATCACTTACGGCAGGAGGTAGACAAGTGGTGCTTGATCATTGCCTGCATGGGCATTGTGACCGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGGGAGAAAATGACAGAGAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAGTTGGATGGTTTGACGAAGAGGAAAATAGTGCTGACAATTTATCCATGCGCTTGGCCAATGATGCTACATTTGTACGAGCTGCTTTCAGTAACCGACTTTCCATATTTATACAGGATAGTGCTGCAGTTATTGTTGCTGTTCTTATTGGTGCATTGCTGCACTGGCGATTGGCACTTGTAGCATTAGCAACCTTTCCCATTCTCTGTGTTTCTGCAATTGCTCAGAAATTGTGGCTTGCTGGATTTTCAAGGGGTATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTCGAAGATGCAGTTAGAAACATTTACACTGTTGTAGCATTTTGTGCTGGTAATAAGGTAATGGAGCTCTATAGGCTGCAGttgaagaaaatatttaagcagAGTTTTCTTCATGGGATGGCCATTGGTTTTGCCTTTGGGTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTTTGCTTTGGTACACTGCACTATGCATAAAGAAAGGTTATACGCAACCGTCTACTGCACTTAAGGAGTACATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCATTTGGATTGGCTCCTTACATACTGAAACGGCGTAAATCTCTCATTTCAGTATTTGATATTATAGATCGTGTGCCTAAAATTGATCCTGATGATAACACAGCATTGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATGTCGACTTCTGTTACCCTTCTCGTCCAGAAGTTTTGGTATTAAGCAATTTTAGTCTCAAAGTGAACGGGGGTCAAACAGTTGCGGTTGTGGGAGTTTCAGGGTCAGGAAAGAGCACTATAATATCCCTGATCGAGAGATTTTATGATCCAGTTGCTGGCCAAGTTTTATTAGATGCTACCATAAGGGAAAACATCATTTATGCAAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCCAATGCTCACCATTTCATAAGTAGTTTGCCTCATGGTTATGACACTCATGTTGGAATGAGGGGTGTTGACTTAACCCCTGGGCAGAAGCAGAGAATTGCAATAGCGAGAGTAGTGCTAAAGAATGCTCCCATCTTGTTGTTGGATGAAGCAAGTTCATCGATTGAATCTGAGTCGAGCAGAGTAGTGCAAGAGGCTCTGGACACTCTTATAATGGGAAACAAGACCACCATCCTAATAGCACATAGGGCTGCAATGATGAGGCATGTCGACAACATCGTCGTGCTTAATGGAGGACGAATAGTAGAGGAAGGAACCCACGATAATTTGGTGGCGAAGAATGGTCTATATGTCCGATTGATGCAACCTCACTTCGGAAAGGCATTGCGTCAGCATCGACTTGTGTAG | 4119 | 0.4336 | MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAETSASHQVEVEEEMEEPEEIEPPPAAVPFSGLFACSDRLDWVLMVVGSLAAAAHGTALVVYLHYFAKIIQVLRMDQSEDQFRRFTELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVMHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSVNQDGTAPVSVQGNIEFRNVYFSYLSRPEIPILSGFYLAVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDATMDQIEEAAKIAHAHTFISSLEKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTRDGLYAELLRCEEAAKLPKRMPVRNYKETAAFQIEKDSSASHSFKEPSSPKMMKSPSLQRVSGVFRPSDGIFNSQESPNARSPPPEKMLENGQSMDTADKEPSIRRQDSFEMRLPELPKIDVHSVHRQKSNGSDPESPVSPLLTSDPKNERSHSQTFSRPLSQSDDVSVQMREAKNTRHREPPSFWRLAKLSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYKIDEDHHLRQEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVLIGALLHWRLALVALATFPILCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTALCIKKGYTQPSTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDRVPKIDPDDNTALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDATIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDNLVAKNGLYVRLMQPHFGKALRQHRLV | 1372 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sto10g0643 | 1372 | MobiDBLite | consensus disorder prediction | 742 | 757 | - | - | |
Sto10g0643 | 1372 | Pfam | ABC transporter transmembrane region | 832 | 1095 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Sto10g0643 | 1372 | Pfam | ABC transporter transmembrane region | 85 | 353 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Sto10g0643 | 1372 | Gene3D | - | 1140 | 1366 | IPR027417 | - | |
Sto10g0643 | 1372 | Gene3D | - | 394 | 646 | IPR027417 | - | |
Sto10g0643 | 1372 | PANTHER | ABC TRANSPORTER B FAMILY | 19 | 1368 | - | - | |
Sto10g0643 | 1372 | MobiDBLite | consensus disorder prediction | 18 | 62 | - | - | |
Sto10g0643 | 1372 | MobiDBLite | consensus disorder prediction | 663 | 730 | - | - | |
Sto10g0643 | 1372 | Gene3D | ABC transporter type 1, transmembrane domain | 796 | 1138 | IPR036640 | GO:0005524|GO:0016021 | |
Sto10g0643 | 1372 | PANTHER | ABC TRANSPORTER B FAMILY MEMBER 20-RELATED | 19 | 1368 | - | - | |
Sto10g0643 | 1372 | SUPERFAMILY | ABC transporter transmembrane region | 813 | 1135 | IPR036640 | GO:0005524|GO:0016021 | |
Sto10g0643 | 1372 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 403 | 638 | IPR003439 | GO:0005524 | |
Sto10g0643 | 1372 | MobiDBLite | consensus disorder prediction | 742 | 805 | - | - | |
Sto10g0643 | 1372 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1139 | 1359 | IPR027417 | - | |
Sto10g0643 | 1372 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1150 | 1360 | IPR003439 | GO:0005524 | |
Sto10g0643 | 1372 | Coils | Coil | 249 | 269 | - | - | |
Sto10g0643 | 1372 | SUPERFAMILY | ABC transporter transmembrane region | 71 | 378 | IPR036640 | GO:0005524|GO:0016021 | |
Sto10g0643 | 1372 | MobiDBLite | consensus disorder prediction | 758 | 797 | - | - | |
Sto10g0643 | 1372 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 827 | 1119 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Sto10g0643 | 1372 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 83 | 378 | - | - | |
Sto10g0643 | 1372 | MobiDBLite | consensus disorder prediction | 663 | 683 | - | - | |
Sto10g0643 | 1372 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 84 | 370 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Sto10g0643 | 1372 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 392 | 637 | IPR027417 | - | |
Sto10g0643 | 1372 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 816 | 1133 | - | - | |
Sto10g0643 | 1372 | Gene3D | ABC transporter type 1, transmembrane domain | 62 | 384 | IPR036640 | GO:0005524|GO:0016021 | |
Sto10g0643 | 1372 | SMART | AAA_5 | 1177 | 1337 | IPR003593 | - | |
Sto10g0643 | 1372 | SMART | AAA_5 | 430 | 743 | IPR003593 | - | |
Sto10g0643 | 1372 | Pfam | ABC transporter | 1168 | 1289 | IPR003439 | GO:0005524 | |
Sto10g0643 | 1372 | Pfam | ABC transporter | 425 | 568 | IPR003439 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sto10g0643 | Sto-Chr10 | 5576974 | 5587209 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sto10g0643 | 53 | 696 | Calmodulin-binding Proteins | AT2G36910 | 44.547 | 2.02e-169 | 539 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sto10g0643 | K05658 | - | gmx:100789116 | 2393.23 |