Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0638 ATGGGTACTCATGATGAGTTACTTACCCGGGATGGCTTATATGCAGAACTTCTTCGATGCGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAGCTTTCCAAATTGAGAAGGACTCATCAGCAAGTCATAGCTTTAAAGAGCCATCATCCCCAAAAATGATGAAGTCACCTTCCCTTCAAAGAGTTTCTGGTGTATTCCGACCTTCAGATGGCATCTTTAACTCTCAGGAATCTCCAAATGCTCGGAGCCCACCGCCTGAGAAGATGCTAGAAAATGGTCAGTCTATGGATACAGCAGATAAGGAGCCATCTATAAGAAGGCAGGACAGTTTTGAAATGAGACTACCTGAGTTACCCAAGATTGATGTTCATTCTGTGCATCGACAAAAATCAAATGGCTCTGACCCAGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCCAAGAATGAACGCTCCCACTCACAGACTTTTAGTAGACCCCTTAGTCAGTCTGATGATGTTTCAGTGCAAATGAGAGAAGCAAAGAATACACGGCATCGAGAACCCCCATCATTTTGGAGGCTCGCAAAACTTAGTTTTGCAGAATGGCTTTATGCTGTGCTAGGAAGCATAGGTGCTGCCATCTTTGGTTCTTTCAATCCTCTTCTTGCATATGTTATCGGCCTAGTGGTGACAGCTTACTATAAAATTGACGAAGATCATCACTTACGGCAGGAGGTAGACAAGTGGTGCTTGATCATTGCCTGCATGGGCATTGTGACCGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGGGAGAAAATGACAGAGAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAGTTGGATGGTTTGACGAAGAGGAAAATAGTGCTGACAATTTATCCATGCGCTTGGCCAATGATGCTACATTTGTACGAGCTGCTTTCAGTAACCGACTTTCCATATTTATACAGGATAGTGCTGCAGTTATTGTTGCTGTTCTTATTGGTGCATTGCTGCACTGGCGATTGGCACTTGTAGCATTAGCAACCTTTCCCATTCTCTGTGTTTCTGCAATTGCTCAGAAATTGTGGCTTGCTGGATTTTCAAGGGGTATACAGGAAATGCACAGAAAGGCATCTTTGGTTCTCGAAGATGCAGTTAGAAACATTTACACTGTTGTAGCATTTTGTGCTGGTAATAAGGTAATGGAGCTCTATAGGCTGCAGttgaagaaaatatttaagcagAGTTTTCTTCATGGGATGGCCATTGGTTTTGCCTTTGGGTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTTTGCTTTGGTACACTGCACTATGCATAAAGAAAGGTTATACGCAACCGTCTACTGCACTTAAGGAGTACATGGTTTTCTCATTTGCAACATTTGCACTTGTGGAGCCATTTGGATTGGCTCCTTACATACTGAAACGGCGTAAATCTCTCATTTCAGTATTTGATATTATAGATCGTGTGCCTAAAATTGATCCTGATGATAACACAGCATTGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATGTCGACTTCTGTTACCCTTCTCGTCCAGAAGTTTTGGTATTAAGCAATTTTAGTCTCAAAGTGAACGGGGGTCAAACAGTTGCGGTTGTGGGAGTTTCAGGGTCAGGAAAGAGCACTATAATATCCCTGATCGAGAGATTTTATGATCCAGTTGCTGGCCAAGTTTTATTAGATGGGAGGGATTTAAAGCTATATAATATGAGATGGTTGAGGAACCACCTTGGTGTAGTTCAGCAGGAACCTATTATCTTCTCAACTACCATAAGGGAAAACATCATTTATGCAAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCTGCAAGAATAGCCAATGCTCACCATTTCATAAGTAGTTTGCCTCATGGTTATGACACTCATGTTGGAATGAGGGGTGTTGACTTAACCCCTGGGCAGAAGCAGAGAATTGCAATAGCGAGAGTAGTGCTAAAGAATGCTCCCATCTTGTTGTTGGATGAAGCAAGTTCATCGATTGAATCTGAGTCGAGCAGAGTAGTGCAAGAGGCTCTGGACACTCTTATAATGGGAAACAAGACCACCATCCTAATAGCACATAGGGCTGCAATGATGAGGCATGTCGACAACATCGTCGTGCTTAATGGAGGACGAATAGTAGAGGAAGGAACCCACGATAATTTGGTGGCGAAGAATGGTCTATATGTCCGATTGATGCAACCTCACTTCGGAAAGGCATTGCGTCAGCATCGACTTGTGTAG 2346 0.4267 MGTHDELLTRDGLYAELLRCEEAAKLPKRMPVRNYKETAAFQIEKDSSASHSFKEPSSPKMMKSPSLQRVSGVFRPSDGIFNSQESPNARSPPPEKMLENGQSMDTADKEPSIRRQDSFEMRLPELPKIDVHSVHRQKSNGSDPESPVSPLLTSDPKNERSHSQTFSRPLSQSDDVSVQMREAKNTRHREPPSFWRLAKLSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYKIDEDHHLRQEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEVGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVLIGALLHWRLALVALATFPILCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGMAIGFAFGFSQFLLFACNALLLWYTALCIKKGYTQPSTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFDIIDRVPKIDPDDNTALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNMRWLRNHLGVVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDNLVAKNGLYVRLMQPHFGKALRQHRLV 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0638 781 PANTHER ABC TRANSPORTER B FAMILY 1 778 - -
Sto10g0638 781 SMART AAA_5 559 746 IPR003593 -
Sto10g0638 781 Pfam ABC transporter transmembrane region 214 477 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g0638 781 MobiDBLite consensus disorder prediction 124 187 - -
Sto10g0638 781 CDD ABC_6TM_Pgp_ABCB1_D2_like 198 515 - -
Sto10g0638 781 Pfam ABC transporter 550 698 IPR003439 GO:0005524
Sto10g0638 781 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 1 778 - -
Sto10g0638 781 Gene3D - 522 777 IPR027417 -
Sto10g0638 781 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 209 501 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Sto10g0638 781 SUPERFAMILY ABC transporter transmembrane region 195 517 IPR036640 GO:0005524|GO:0016021
Sto10g0638 781 Gene3D ABC transporter type 1, transmembrane domain 178 521 IPR036640 GO:0005524|GO:0016021
Sto10g0638 781 MobiDBLite consensus disorder prediction 140 179 - -
Sto10g0638 781 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 768 IPR027417 -
Sto10g0638 781 MobiDBLite consensus disorder prediction 124 139 - -
Sto10g0638 781 MobiDBLite consensus disorder prediction 43 112 - -
Sto10g0638 781 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 532 769 IPR003439 GO:0005524
Sto10g0638 781 MobiDBLite consensus disorder prediction 43 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0638 Sto-Chr10 5534986 5538640 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0638 149 768 Calmodulin-binding Proteins AT2G36910 41.390 6.86e-168 517
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0638 K05658 - gmx:100789116 1371.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0638 10 5534986 5538640 Sto10g0638 10 5534986 5538640 ECH