Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0633 ATGACGAAGCAAATTAGAGATGTTGATGTTGATCATCATCATAACATAGCCATAGCCAATTGCTTGATGCTACTTTCTCACCAAGGAGCCCAATTTGTTGAGACTTCATCGATAATCCCATCTTCTCATCATGATCACCACCAAAGAGTCTTCGAGTGCAAGACTTGTAATCGCCAGTTCCCGTCGTTTCAGGCGCTCGGGGGCCACCGTGCAAGTCACAAGAAGCCGAGGATTCCGATCGGAGGCGGTGGCAGCGCCGGAGAGGCCGATGATTATGATTATGGTGGGAAGGCTAATAAAACACACGAGTGTTCTATTTGTGGATTGGAGTTTGCAATAGGGCAGGCTTTGGGTGTGTCACAGGAGAAAGTTAATTAA 378 0.4709 MTKQIRDVDVDHHHNIAIANCLMLLSHQGAQFVETSSIIPSSHHDHHQRVFECKTCNRQFPSFQALGGHRASHKKPRIPIGGGGSAGEADDYDYGGKANKTHECSICGLEFAIGQALGVSQEKVN 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0633 125 PANTHER OS03G0279700 PROTEIN 9 118 - -
Sto10g0633 125 MobiDBLite consensus disorder prediction 67 90 - -
Sto10g0633 125 ProSitePatterns Zinc finger C2H2 type domain signature. 53 73 IPR013087 -
Sto10g0633 125 ProSiteProfiles Zinc finger C2H2 type domain profile. 51 78 IPR013087 -
Sto10g0633 125 Gene3D Classic Zinc Finger 49 121 - -
Sto10g0633 125 SUPERFAMILY beta-beta-alpha zinc fingers 49 116 IPR036236 -
Sto10g0633 125 Pfam C2H2-type zinc finger 50 76 - -
Sto10g0633 125 Pfam C2H2-type zinc finger 102 118 - -
Sto10g0633 125 PANTHER ZINC FINGER PROTEIN ZAT5 9 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0633 Sto-Chr10 5501226 5502021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0633 15 118 C2H2 Transcription Factor Family AT2G37430 48.571 1.07e-23 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Sto10g0633 zf-C2H2_6 3.1e-13 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0633 - - mnt:21408076 123.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0633 10 5501226 5502021 Sto10g0633 10 5501226 5502021 ECH