Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0632 ATGCAGGATGCTTGGCTGAAGAAAATATCGGATATGAGAACTCTTCAAGAATTGAACCAAAGCGTGGTCATCAATGGTTTATGGAAACGGGAGAACCAGAAATTGTCAGCAGCAATAAGAAGCAAGCAATTGAATCTGACTTTCAATTTGGTTGATAAGAACATGCCATCAATTGGAAGTGGAAATCTAAATATGGGAAGGAAAGATTTTGAGAATAACTATGGAAATGATCCATCAGTTGGATTGTCAATATCTCATTCTATTGAGGACCCTTCATCTTGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATACTAACAATTGCATGCCTGCATCTATGGGGCACTCCTATAGTAGGTCTGATAATAGTGCAGTTTCAGCAGGTTCTGGCTACAGTAAGAGTGATGGAAACATATCATTAGGTCAGACTTATAACAATGGAAATGGGATTGTCCCTATGGGAACTACAATAAATAAGGCTGATGATAGTCTTGTTTCGATGGGTCACAACTTCAATAAGGGAGATGGAAGTTTTATGCTGTTGGGCCACCCTTACGGCAAGGGAGACGAAAACATCTTATCAATGGGTCAGCCCTTTTACATGGGAGATGAAAATTTCATATCAATGGGTCAGTCATATGAAAAGGATGATAGCAATATGATATCATTGGGAAACTCATATAACAAGGGGCATGGAAATTTCATATCAATGGGTCCACCATATAGTAAATCAGGAGAAAATTTCATATCAATTGCTCCCTCCTATGACAAGGGAACTGATCATGTCATACCAGTGGGTCCTACCTATGACAAGGTGGATTCAAACATTGTATCAACAAATCCTTCATATGACAAAGGAGATTCTAGCTCTCTACCAGTGGATCACAACTACAATAAGAGTGAGGGCTGTACCATATCTTTTGGAGGCTTTCATGATGACCCAGAGCCAAATCCGTCTGGTGGTATTATTAGTGGCTATGATCTGTTAATGGGCAATCAGAACTCTGCTCAAGGTTTCCATGGTCAGAAGGATATGACTGAGTCAAACCCTGAACCAATTGTAAATAGCAATccaaaattaaattctaaaactgATACTATCCTTAAGAATAAGGAACCAAAAACAAGCAAGAAGGTTCCTACAAACAACTTCCCTTCGAATGTCAAAAGTCTGTTATCAACTGGTATTTTTGATGGTGTTCCTGTGAAGTATGTTTCTTGGTCACGGGAGAAAAATCTCAAAGGAGTCATAAAAGGGACTGGGTATTTGTGTTCGTGTGATGAATGCAAGCTGTCCAAGTCTCTTAATGCATATGAGTTCGAGCGTCATGCTGGTGCCAAGACCAAACACCCTAACAATCACATATACTTTGAGAATGGAAAAACTATCTACGCCGTCGTTCAAGAGCTTAAGAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAACTGTTACTGGATCTACCATCAACCAGAAAAACTTCCGTGTCTGGAAAGCATCATACCAAGCTGCAACTCGGGAACTTCAGCGTATATATGGAAAGGATGAAGTGGTGATACCATCTTGA 1587 0.3926 MQDAWLKKISDMRTLQELNQSVVINGLWKRENQKLSAAIRSKQLNLTFNLVDKNMPSIGSGNLNMGRKDFENNYGNDPSVGLSISHSIEDPSSCLNFGGIRKVKVNQVRDTNNCMPASMGHSYSRSDNSAVSAGSGYSKSDGNISLGQTYNNGNGIVPMGTTINKADDSLVSMGHNFNKGDGSFMLLGHPYGKGDENILSMGQPFYMGDENFISMGQSYEKDDSNMISLGNSYNKGHGNFISMGPPYSKSGENFISIAPSYDKGTDHVIPVGPTYDKVDSNIVSTNPSYDKGDSSSLPVDHNYNKSEGCTISFGGFHDDPEPNPSGGIISGYDLLMGNQNSAQGFHGQKDMTESNPEPIVNSNPKLNSKTDTILKNKEPKTSKKVPTNNFPSNVKSLLSTGIFDGVPVKYVSWSREKNLKGVIKGTGYLCSCDECKLSKSLNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQTVTGSTINQKNFRVWKASYQAATRELQRIYGKDEVVIPS 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0632 528 MobiDBLite consensus disorder prediction 345 370 - -
Sto10g0632 528 Pfam Tify domain binding domain 421 476 IPR032308 -
Sto10g0632 528 PANTHER AUTOIMMUNE REGULATOR 40 528 - -
Sto10g0632 528 PANTHER N-LYSINE METHYLTRANSFERASE 40 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0632 Sto-Chr10 5488916 5490942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0632 380 509 PHD Transcription Factor Family AT3G53680 54.615 1.29e-41 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0632 - - gmx:100782217 777.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0632 10 5488916 5490942 Sto10g0632 10 5488916 5490942 ECH