Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0629 ATGAGGAATGCTCTTCTACCAACTGTGTCTTCAAAGCTTCACTACTGCTAtgGAGACACTACTGAAGTGCAATTGGAACATTTTAAAGCTGGCATGCAGATGCAAGATCTTATTCATTTTCACAACAATGGGTTGTGCATGGAATCTAGAATATTAAACAATGACATCCAATTGAGAAGAGGAGGCTATACAATAATGCCTAGCCAGTCTCAATCCCTTAATATTCAACAAGATAGTTCATATCGTGTATCAAGCACCAAAGACATTTCTCACAAATCCTTGTTACCCAGCGAGAGACCCATAGATTCTCACTTTGATGAAGTGAGAGGAAATGCAAAAAAGCGTCCTTTTGAAGTGAATGATAAGGATAACATGGCTGTGTTTAAGAAGATTAAAGGCAATCTCCAAAGCAAAATCACAAACTTGGGATCAAAATGGCATCACACAAGAGATCAGGCTTTAGAGAAAATTCCGAAGAACAATGTGCATGTGCCTGTGAGGAGAAATCAAAAGCTCAGTGATAAAATAACAACTCTACAAAAGTTGGTTTCCCCTTTTGGCAAGACTGACACTGCCTCAGTTCTTCAAGAGGCTTCTCTCTATATCAAGCTTCTTCAAGAACAAATCAGGAATTTGTTTCATATGCTGAGTTTCTCCTACAAAAATACTGCTCAAGTCCCTCCATATAAACAGGTAGATAATTAA 705 0.3801 MRNALLPTVSSKLHYCYGDTTEVQLEHFKAGMQMQDLIHFHNNGLCMESRILNNDIQLRRGGYTIMPSQSQSLNIQQDSSYRVSSTKDISHKSLLPSERPIDSHFDEVRGNAKKRPFEVNDKDNMAVFKKIKGNLQSKITNLGSKWHHTRDQALEKIPKNNVHVPVRRNQKLSDKITTLQKLVSPFGKTDTASVLQEASLYIKLLQEQIRNLFHMLSFSYKNTAQVPPYKQVDN 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0629 234 CDD bHLH_AtbHLH_like 167 212 IPR045239 -
Sto10g0629 234 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 29 224 - -
Sto10g0629 234 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Sto10g0629 234 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 167 215 IPR036638 GO:0046983
Sto10g0629 234 Gene3D - 163 223 IPR036638 GO:0046983
Sto10g0629 234 PANTHER TRANSCRIPTION FACTOR BHLH112 29 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0629 Sto-Chr10 5452018 5460599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0629 168 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G05170 73.810 1.58e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0629 - - ccaj:109812405 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0629 10 5452018 5460599 Sto10g0629 10 5452018 5460599 ECH