Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0613 ATGGCGAATACATCACAGAATTTGGCCATTGGAATCGATCTCGGAACCACTTATTCGTGCGTTGCTGTGTGGGACCACGATCGCGTGGAGATCATCGTCAACGAGCAAGGCAACAGAACGACGCCATCTTGTGTTTCCTTCACTGAAACCCAACGGATGGTGGatGCGAAGAGGTTAATCGGTAGGAAATTTAGTGACATCCATGTTCAAAGCGATATAAACCTTTGGCCATTTAAGGTTATTGCTGGTGTTGATGACAAGCCCATCATTGTTGTAAATTATAAGAACGAGGAAAAGCATTTTTTCCCGGAGGAAATATCATCGATGGTACTAGCAAAGATGCGTGAGACCGCAGAGGCTTACGTTGGTTCAACGGTGAAGAATGCAGTTGTCACTGTTCCGGCTTTCTTCAACAATTCTCAACGCCGAGCTACGAAAGAGGCTGGTACTATTTCTGGCCTCAACGTTATGCGAATAATCAACGAGCCAATTGCTGCTGCGCTTGCATATGGTCTCCACAAGAAGGATAGGTTTGGCAAGGAGAGAAACGTTCTCATCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTCACTATAAAGGAGAATAACTTCAATGTTAAGGTTACTGATGGTGACACTCACCTTGGAGGAGAGGACTTTGACAACAGAATGGTGAATCACTTTGTGACAGAGTTCAGGAGGATGTATAAGAAGGACATTAGTGTGAATCCAAAGGCCCTTCGGAGGCTGAGAACTGCTTGTGAGAAAGCAAAGAGAATACTATCATCCACAACTGAGACTGCCATTGATGTTGATGCTTTATACGAAGGCATCGACTTCTGTTCATCAATCACTCGAGCTCTGTTCAACGAATTGAACAAAGATCTCTTCACAAGGTGTATGGAGATTGTAAAAAAGTGTCTTCTGGATGCAAAGATGGAGAAGACTAGTGTTGACGATGTTGTTCTTGTTGGTGGGTCTTCAAGAATTCCCAAAATTCAACAATTATTGCAAGAGTTTTTCGATGGGAAGGATTTATGCAAGAGCATCAACCCTGATGAGGCTGTGGCTTATGGTGCTGCAGTTGAAGCAGCTATATTGAGTGGTAAAGGCAGTGAGAAGATTCAGGACATTGTATTGAGGGATGTCACACCATTATCCTTAGGAGTAGCCACATATGGTGGTGGCTTTTCCGTAATAATTCCAAGGAACACTATCTTCCCTACAACAATGTCAAAAAGTACATATACTACACCCTTAGATTACATTAGCACAGTTTCAGTGTCGGTCTATGAGGGTGAGAGAGCAAGAGCGTTGGATAACAACTTTCTAGGAACATTTAGGCTACCCATTCCTGCTGCACAACGTTGTGTTATTAAGATCGATGTTATCTTCTCCATTGATGAGAATGGCATCTTAAATGTCTATGCTAAGGAATTACTCACAGGGAACAATAATAACATTACCATAACTAATTACAAAGGAAGATTATCTGAGGAAGAAATTGCGAGGATGGTGAAAGAAGCTGAGCAATACAAGGCTGAGGATGAAAAGTTTAAGAAGATGGTTGAAGCAAGGAATGATTTGGAGGAATTTTTGTACAACGATGATATATAA 1623 0.4202 MANTSQNLAIGIDLGTTYSCVAVWDHDRVEIIVNEQGNRTTPSCVSFTETQRMVDAKRLIGRKFSDIHVQSDINLWPFKVIAGVDDKPIIVVNYKNEEKHFFPEEISSMVLAKMRETAEAYVGSTVKNAVVTVPAFFNNSQRRATKEAGTISGLNVMRIINEPIAAALAYGLHKKDRFGKERNVLIFDLGGGTFDVSLLTIKENNFNVKVTDGDTHLGGEDFDNRMVNHFVTEFRRMYKKDISVNPKALRRLRTACEKAKRILSSTTETAIDVDALYEGIDFCSSITRALFNELNKDLFTRCMEIVKKCLLDAKMEKTSVDDVVLVGGSSRIPKIQQLLQEFFDGKDLCKSINPDEAVAYGAAVEAAILSGKGSEKIQDIVLRDVTPLSLGVATYGGGFSVIIPRNTIFPTTMSKSTYTTPLDYISTVSVSVYEGERARALDNNFLGTFRLPIPAAQRCVIKIDVIFSIDENGILNVYAKELLTGNNNNITITNYKGRLSEEEIARMVKEAEQYKAEDEKFKKMVEARNDLEEFLYNDDI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0613 540 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 367 539 IPR029047 -
Sto10g0613 540 Gene3D - 175 349 - -
Sto10g0613 540 Pfam Hsp70 protein 9 537 IPR013126 GO:0005524|GO:0140662
Sto10g0613 540 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 375 532 IPR029047 -
Sto10g0613 540 Gene3D Actin; Chain A, domain 4 218 301 - -
Sto10g0613 540 Gene3D - 10 366 - -
Sto10g0613 540 PANTHER HEAT SHOCK PROTEIN 70KDA 2 537 IPR013126 GO:0005524|GO:0140662
Sto10g0613 540 ProSitePatterns Heat shock hsp70 proteins family signature 2. 186 199 IPR018181 -
Sto10g0613 540 Gene3D - 55 109 - -
Sto10g0613 540 PRINTS 70kDa heat shock protein signature 8 21 - -
Sto10g0613 540 PRINTS 70kDa heat shock protein signature 36 48 - -
Sto10g0613 540 PRINTS 70kDa heat shock protein signature 129 149 - -
Sto10g0613 540 PRINTS 70kDa heat shock protein signature 192 202 - -
Sto10g0613 540 PRINTS 70kDa heat shock protein signature 320 336 - -
Sto10g0613 540 PRINTS 70kDa heat shock protein signature 352 372 - -
Sto10g0613 540 PRINTS 70kDa heat shock protein signature 379 398 - -
Sto10g0613 540 PRINTS 70kDa heat shock protein signature 460 476 - -
Sto10g0613 540 SUPERFAMILY Actin-like ATPase domain 180 371 IPR043129 -
Sto10g0613 540 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Sto10g0613 540 ProSitePatterns Heat shock hsp70 proteins family signature 3. 323 337 IPR018181 -
Sto10g0613 540 SUPERFAMILY Actin-like ATPase domain 8 174 IPR043129 -
Sto10g0613 540 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 2 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0613 Sto-Chr10 5302060 5303814 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0613 1 537 Calmodulin-binding Proteins AT3G12580 66.667 0.0 743
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0613 K03283 - csv:101210925 714.146