Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0611 ATGGGGAAGACATCACATAATTTGGCCATTGGAATCGATCTCGGAACCACCTACTCCTGCGTTGCTGTGTGGAAGTCCGATCGTGTGGAGATCATCGTGAACGACCAGGGAAACAGAACGACGCCGTCTTATGTTTCCTTCACTGATGACCATAGGATGGTGGGTGAAGCTGCTAAGAACAAGGCTGCTGTTAATCCTATTAACACTGTCTTTGATGCGAAGAGGTTAATCGGCAGAAAATTTAGTGATGCCCATGTTCAAAGTGATATTAACCTTTGGCCATTCAAGGTCATTGCTGGTGTTGATGACAAGCCCATGATTGTTGTAAATTATAAGCATGAGGAAAGGAATTTTCGGCCGGAGGAAATATCATCCATGGTGCTAGCAAAGATGCGTGAGACAGCAGAGGCTGAAAGTGATGATCACATCATCAACATAGATAAGAATGAAGAGGCTGGAGGAAGAAGAGTAGTAGGGACTGCTGCACTTTCTGGACTAGACGAGTCTATAGATTGTGTGGAACCTGCACAAGGAATAGAAGAGCTAGCAGTATCTTGTTCACAAGGGATAGAAATTAATTCAGGTGAGGTTGGAAACATCATTGGTGAGGTGACTAGAGGCTCCACTATTTGGTATTTTGGTTCTGAATCTGGGCTTGCCTCAGAGTTTCAGCAGTATAGTTGTGATCAAATCGATTATAGCATGGACTCAATCTTGAACTTCTCAAGTCTGGCTTCTTGGGCAAGAAGATGTGCTTCAATCTGCCCAACTGTTAATCTTTTCCTCTTGAGAGACAGAGAGGTAATAAATCCCTCGTACTCTGAAGGGAGACCATCAAAAATAGTCTGGATGTGGTCTCTTTCTGAAACAGGAGAATTGATAGATGCTAGAGCATCTACAACCTTCTTTAACTTTAGAAGCTGTGAGAACATCCCACCATCCTTGACACCATTCCTTCAGTCATGGACATCAAGATCCACTGAGATATTGCTTAGGAACTTGGTCTTCTCCAAGAAGGTATGGGTAGAGGTCATACCCATTAACCATTGTGACGACTTGCAGTCTCCAAACGAGGAAGTTGAGATCATCCAATTTGAGGCCTACCTTGGTTCAACAGTGAAGAATGCAGTTATCACTGTTCCTGCTTACTTCAACGACTCTGAACGTCGAGCCACCAAAGAGGCTGCTGCTATTATTGGCCTCAACGTTACGCGAATAATCAACGAGCCCACTGCTGCAGCACTTGCATATGGTCTTCACAAGAAAAATAATTGCGGTCAGGAGAGAAACATTTTCATCTTTGATCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTCACTATTAACAAGAACAAGTTTGAAGTTAGAGCCACTAATGGTGATACTCACCTTGGAGGAGAAGACTTTGACAACAGAATGGTGAACCACTTTGTGAAAGAGTTAAAGACGAAGCATAAGAAGGACATTAGTGGGAATCCAAGGGCTCTTAGGAGGCTGAGAACTGCATGTGAAAGGGCAAAGAGAATACTCTCTTCCACATTTGACACCGCTATTGATGTTGATGCTTTATATGAGGGCATCGACTTCTGTTCATCCATCACTCGTGCTAAGTTTGACGAAATGAACAAAGATTTGTTCACAAAGTGTATGGAAATTGTAAACAAGTGCCTTCTGGATGCCAAGATGGAGAAGAGTAGGATCGATGATGTTGTACTTGTTGGTGGGTCTTCAAGGATTCCGAAGATTCAGCAATCATTGCAAGAGTTATTCAATGGGAAGGATTTGTGCAAGAGCATAAACCCTGATGAGGCTGTTGCTTATGGTGCTGCAGTTCAAGCTGCTATACTGAGTGGTGGAGGCAGTGAGAAGATTCAAGACATTGTATTGAGGGATGTCACACCATTGTCCTTAGGAGTTAAGAAGTTGGTTGAAGCAAAGAACGCATTGGAGGATTATTTGTACAACGTGAAGCATACTATAATGGATATTGCCTCAAAGCTTTCCCAAGCCGACAAGAAACAGACAAAGGATGCAATTAAGAAGGCCAAAGTATGGCTTAATGCTAACTCGCATGCAAaatttgatgagtttgtatGGAAGATGAAGGACAATGAGAGCGTATTGAATCCCATTATATCCAAGGCGAGGGTGAAGGGCACTGATCGTGGCagtagaaaaagaagaaagacaaaTATGATATCAAAATTGCCCAAACTTGCTGGTGATGTGGGTGAGATGGCTTCAACTATATCTTCCATTTTATCAGATATTCTCAAAGTGCTATAA 2286 0.4221 MGKTSHNLAIGIDLGTTYSCVAVWKSDRVEIIVNDQGNRTTPSYVSFTDDHRMVGEAAKNKAAVNPINTVFDAKRLIGRKFSDAHVQSDINLWPFKVIAGVDDKPMIVVNYKHEERNFRPEEISSMVLAKMRETAEAESDDHIINIDKNEEAGGRRVVGTAALSGLDESIDCVEPAQGIEELAVSCSQGIEINSGEVGNIIGEVTRGSTIWYFGSESGLASEFQQYSCDQIDYSMDSILNFSSLASWARRCASICPTVNLFLLRDREVINPSYSEGRPSKIVWMWSLSETGELIDARASTTFFNFRSCENIPPSLTPFLQSWTSRSTEILLRNLVFSKKVWVEVIPINHCDDLQSPNEEVEIIQFEAYLGSTVKNAVITVPAYFNDSERRATKEAAAIIGLNVTRIINEPTAAALAYGLHKKNNCGQERNIFIFDLGGGTFDVSLLTINKNKFEVRATNGDTHLGGEDFDNRMVNHFVKELKTKHKKDISGNPRALRRLRTACERAKRILSSTFDTAIDVDALYEGIDFCSSITRAKFDEMNKDLFTKCMEIVNKCLLDAKMEKSRIDDVVLVGGSSRIPKIQQSLQELFNGKDLCKSINPDEAVAYGAAVQAAILSGGGSEKIQDIVLRDVTPLSLGVKKLVEAKNALEDYLYNVKHTIMDIASKLSQADKKQTKDAIKKAKVWLNANSHAKFDEFVWKMKDNESVLNPIISKARVKGTDRGSRKRRKTNMISKLPKLAGDVGEMASTISSILSDILKVL 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0611 761 Gene3D - 365 613 - -
Sto10g0611 761 Gene3D - 5 161 - -
Sto10g0611 761 Gene3D Actin; Chain A, domain 4 466 549 - -
Sto10g0611 761 Gene3D - 638 716 IPR029048 -
Sto10g0611 761 Pfam Hsp70 protein 366 640 IPR013126 GO:0005524|GO:0140662
Sto10g0611 761 Pfam Hsp70 protein 9 143 IPR013126 GO:0005524|GO:0140662
Sto10g0611 761 PRINTS 70kDa heat shock protein signature 8 21 - -
Sto10g0611 761 PRINTS 70kDa heat shock protein signature 36 48 - -
Sto10g0611 761 PRINTS 70kDa heat shock protein signature 58 66 - -
Sto10g0611 761 ProSitePatterns Heat shock hsp70 proteins family signature 2. 433 446 IPR018181 -
Sto10g0611 761 Gene3D - 418 600 - -
Sto10g0611 761 Gene3D - 71 122 - -
Sto10g0611 761 PANTHER HEAT SHOCK PROTEIN 70KDA 366 640 IPR013126 GO:0005524|GO:0140662
Sto10g0611 761 PANTHER HEAT SHOCK PROTEIN 70KDA 640 721 IPR013126 GO:0005524|GO:0140662
Sto10g0611 761 PANTHER HEAT SHOCK PROTEIN 70KDA 2 137 IPR013126 GO:0005524|GO:0140662
Sto10g0611 761 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 644 715 IPR029048 -
Sto10g0611 761 SUPERFAMILY Actin-like ATPase domain 364 421 IPR043129 -
Sto10g0611 761 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Sto10g0611 761 SUPERFAMILY Actin-like ATPase domain 7 144 IPR043129 -
Sto10g0611 761 SUPERFAMILY Actin-like ATPase domain 427 618 IPR043129 -
Sto10g0611 761 ProSitePatterns Heat shock hsp70 proteins family signature 3. 570 584 IPR018181 -
Sto10g0611 761 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 640 721 - -
Sto10g0611 761 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 366 640 - -
Sto10g0611 761 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 2 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0611 Sto-Chr10 5279314 5286082 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0611 366 714 Calmodulin-binding Proteins AT5G02500 68.091 7.95e-162 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0611 K03283 - csin:114277576 439.499