Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0609 ATGGGGAAGACATCAAAGAATTTGGCCATCGGAATCGACCTTGGCACCACTTATTCCTGCGTCGCTGTGTGGAAGTCCGATCGGGTGGAGATAATAGTGAATGACCAAGGGAACAGAACGACGCCGTCTTATGTTACCTTCACAGATACCCAACGAATGGTGGGTGAAGCTGCTAAGAACAAGGCTGCTGTTAGTCCTATTAACACCGTCTTCGATGCGAAGAGGTTAATTGGTAGGAAATTTAGTGACACCCATGTTCGAAATGATATGATGCTTTGGCCGTTTAAGGTCATTTCTGGTGTTGATGACAAGCCCATGATTGTTGTGAATTATAAGTCCGAGGAAAAACATTTTCTCCCCGAGGAAATATCATCCATGGTACTCTCGAAGATGCGTGAGACAGCAGAGGCTTACCTCGGTTCAACAGTGAAGAATGCAGTTATCACCGTGCCTGCTTACTTCAACGACTCTGAACGTCGAGCCACCAAAGAGGCTGCTGCTATTTCTGGCCTCAACGTTATGCGAATAATCAATGAGCCCACTGCTGCAGCACTTGCTTATGGTCTTCACAAGGAAGATGATTGCAGACTGGAGAGAAACATTTTCATCTTCGATCTTGGTGGTGGAACTTTTGATGTGTCTGTCCTCACAATTAAGAAGAATAGGTTTGAAGTTAAGGGCGTTGATGGTGATACTCACCTTGGAGGAGAAGACTTTGACAACAGAATGGTGAACCACTTTGTGGAAGAGTTTAGGAGGAAGCATAAGAAGGACATTAGTGATAGCCCACGTGCTCTTAGAAGGTTGAGAACTGCGTGTGAGAAGGCGAAGAGGATACTGTCATCCTTAACTGAGACAGCCATTGATGTTGATGCTTTATATGAGGGCATCGACTTCTGTTCATCAATTACTCGTGCTAAGTTCGACGAATTGAATAGAGATCTGTTTACAAAGTGTATGGAAATTGTAAACAAGTGTCTTTTGGATGCAAAGATGGACAAGAGCAGTGTTGATGATGTTGTCCTTGTTGGTGGGTCTTCAAGGATTCCGAAGATTCAGCAATCATTGCAAGAGTTGTTCAATGGGAAGGATTTGTGTAAGAGCATAAACCCTGATGAGGCTGTTGCTTATGGTGCTGCAGTTCAAGCTGCTATATTGAGTGGTGGAGGAAGTGACAAGATTCAGAACATTGTATTGAGGGATGTCACACCATTGTCCTTAGGAGTTGAGCTTAAGAGTGGTACCTTTGCCGTAATAATTCCAAGGAACACTATCATTCCAACCACAATGTCACGAGGTGGATATACCACAGCGTCAGATTACATTAGCACAATTTCAGTTGATGTTTATGAGGGTGAAAGAGCAAGAGTTGATGACAACCACTTTCTAGGAACATTTGATCTACCCATTCCTGTTGCACGTCGAGGTGTTGCTGACATCAAATTTTGCTTTTCCATTGATGAGAATGGAATCTTGGATGTCACTGCTGAGGAATTAAAGAGtggaaacaaaacaaataagatCATAACTAACGATGAAGAAAGACTATCATGTGAAGAAATTAAGAAGATGGTAAAAGAAGCAGAGCAATACAAGGCAGAGGACGTGGAGTTTAAGAAGATGGCAGAAGCCAAGAATGCATTGGAGGATTATTTGTACAACGTCAAGCACACAATAATGGATAATGCCTCCATTCTTTCCCGAGCAAACAAGAAGAAGACTAAGGATGCAATTGAGGAGGCCCAAGTATGGATTAATAATAACTCAAATGCAAAATTTGATGAGCTCGTGTCCAAGATGGAGGAACTTGAGAGTGTATTGAATCGCATCGTATTGAATAATAAAGTAGATCGTGACACTAGAAAAAGAATGAAGGAAGATATGATATCAAAATTGCCGTCACTTGCTGGTGATGTGAGCGAGATGGCTTCTACTGTAGCTTCTATTTTATCAGATATTCTGGAAGTACTATAA 1974 0.4184 MGKTSKNLAIGIDLGTTYSCVAVWKSDRVEIIVNDQGNRTTPSYVTFTDTQRMVGEAAKNKAAVSPINTVFDAKRLIGRKFSDTHVRNDMMLWPFKVISGVDDKPMIVVNYKSEEKHFLPEEISSMVLSKMRETAEAYLGSTVKNAVITVPAYFNDSERRATKEAAAISGLNVMRIINEPTAAALAYGLHKEDDCRLERNIFIFDLGGGTFDVSVLTIKKNRFEVKGVDGDTHLGGEDFDNRMVNHFVEEFRRKHKKDISDSPRALRRLRTACEKAKRILSSLTETAIDVDALYEGIDFCSSITRAKFDELNRDLFTKCMEIVNKCLLDAKMDKSSVDDVVLVGGSSRIPKIQQSLQELFNGKDLCKSINPDEAVAYGAAVQAAILSGGGSDKIQNIVLRDVTPLSLGVELKSGTFAVIIPRNTIIPTTMSRGGYTTASDYISTISVDVYEGERARVDDNHFLGTFDLPIPVARRGVADIKFCFSIDENGILDVTAEELKSGNKTNKIITNDEERLSCEEIKKMVKEAEQYKAEDVEFKKMAEAKNALEDYLYNVKHTIMDNASILSRANKKKTKDAIEEAQVWINNNSNAKFDELVSKMEELESVLNRIVLNNKVDRDTRKRMKEDMISKLPSLAGDVSEMASTVASILSDILEVL 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0609 657 Coils Coil 266 286 - -
Sto10g0609 657 Gene3D Actin; Chain A, domain 4 235 318 - -
Sto10g0609 657 PANTHER HEAT SHOCK PROTEIN 70KDA 3 613 IPR013126 GO:0005524|GO:0140662
Sto10g0609 657 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 612 IPR029048 -
Sto10g0609 657 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Sto10g0609 657 SUPERFAMILY Actin-like ATPase domain 199 386 IPR043129 -
Sto10g0609 657 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 549 IPR029047 -
Sto10g0609 657 Gene3D - 545 614 IPR029048 -
Sto10g0609 657 Pfam Hsp70 protein 9 611 IPR013126 GO:0005524|GO:0140662
Sto10g0609 657 PRINTS 70kDa heat shock protein signature 8 21 - -
Sto10g0609 657 PRINTS 70kDa heat shock protein signature 36 48 - -
Sto10g0609 657 PRINTS 70kDa heat shock protein signature 58 66 - -
Sto10g0609 657 PRINTS 70kDa heat shock protein signature 146 166 - -
Sto10g0609 657 PRINTS 70kDa heat shock protein signature 209 219 - -
Sto10g0609 657 PRINTS 70kDa heat shock protein signature 337 353 - -
Sto10g0609 657 PRINTS 70kDa heat shock protein signature 369 389 - -
Sto10g0609 657 PRINTS 70kDa heat shock protein signature 396 415 - -
Sto10g0609 657 PRINTS 70kDa heat shock protein signature 477 493 - -
Sto10g0609 657 Coils Coil 586 606 - -
Sto10g0609 657 SUPERFAMILY Actin-like ATPase domain 9 191 IPR043129 -
Sto10g0609 657 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Sto10g0609 657 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Sto10g0609 657 Gene3D - 192 366 - -
Sto10g0609 657 Gene3D - 71 126 - -
Sto10g0609 657 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Sto10g0609 657 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37C-RELATED 3 613 - -
Sto10g0609 657 Gene3D - 10 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0609 Sto-Chr10 5269919 5272660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0609 1 611 Calmodulin-binding Proteins AT3G12580 66.124 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0609 K03283 - pda:103696725 786.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0609 10 5269919 5272660 Sto10g0609 10 5269919 5272660 ECH