Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0600 ATGGATCCAATATTGGAGAACACATCGGAGAATAATGATGAGACCGAAGGAGTCGATCCAATAATGCTTGAAGAGGAAAATTCTACTAACACCGTTGgaaACGAAAAGCACAATCCGACGAAGATCGCGGTGAATGATCAGGCAGAGAAGACATCATCAGAGAATAATGTGGATATCGGAATCGATCCCGTGAATGATCAGGCAAAGGAGACATCGGAGAATAGTGCGGACATCGGAATCGATCCTGTGAATGAGCATGAGGAGGCAGAGGCAGAGACGAAGACATCAGAAAATAATGTGGACATCGGAATCGATCTTGTGAATAATGAGACAGAGAAGACATCAGAGAATAATGTAGACATTGGATTCGATTCCCATACTACTGATGTAAAGGAGAAAGAGCACAATCAGAGTGAGAACATCGTGAACGAACAAGACAGTGAGGCGAAAACCAACATAAATGATGAGGCGGAGAAGACATCAGAGAATAACGTAGACAATGGATTCGATTCCCATACTGATGTAAAGGATAAAGATCACAATAAGAGTGAGAACATCGCGAAAAGCAACGTAAATGATGAGGCGGAGAAGACATCAGAGAATAAAAAGAATGTGGCGATCGGAATCGATCTGGGCACGACATACTCGTGTGTTGCTGTGTGGGAGGAAGAGCAGAATCATGCGGAGATCATCGTGAACGATCAAGGCAACAGAACGACGCCGTCTTACGTTGCCTTCACTGATACCCATCGGATGGCGGGTGAAGCTGCTAAGAACAAGGCTGCTTCTAATCCTATTAACACCGTCTTTGATGCAAAGCGATTAATCGGAAGGAAATTCAGTGACGCCCAAGTTCAAAGTGATATGAAGCTTTGGCCATTTAAGGTCATTGCCGGTGATGATGACAAGCCCATGATTGTTGTAAATTACAAGAAtgaggaaaagaaattttttccagAGGAAATATCATCCATGGTATTAGCAAAGATGCGTGATATAGCAGAGACATACCTTGATTCACCGGTGCATAATGCAGTTATCACTGTACCTGCTTTCTTCAACGACTCTCAACGTCGAGCCACCAAAGACGCCGGTGCTATTTCTGGCCTCAACGTTATGCGAATAATCAACGAGCCTACTGCTGCAGCGCTTGCATATGGTCTTCACAAGAAAGATAGGTTCACCCAACAAAGAAACATTGTCATCTTCGATCTCGGTGGTGGTACTTTCGATGTCTCCATCCTAACAATTAAGGACACCGATTTCAAAGTCCTGGCTACGGATGGTGACACTCACCTCGGAGGAGAGGACTTCGACAACAGAATGGTGAATCATTTTGTGGAAGAGATCAAGAAGAAGTACAATAAGGACATTAGTGGAAATCCAAGGGCACTTAGGAGGCTGAGAACTGCGTGTGAGAAGGCAAAGAGAATACTGTCATCCACCGCCGAGACGTACGTCGATGTCGAGGCTTTGTACGACGGCGAAGACTTCTTTTCATCCATGAGTCGTGCTAAGTTTGACGAATTGAACATCGATCTCTTCACAAGATGTATGGAGATTGTAGAAAGGTGTCTCTCGGATGCCAAGATGGACAAAAGTCGTGTTGACGACGTTGTGCTTGTTGGTGGGTCTTCGAGAATTcccaaaattcaaaaactaTTGCAGGAGTTGTTCAATGGGAAGCATTTGTGCAAGAGCATAAACCCTGATGAGGCTGTTGCTTATGGTGCCGCAGTTCAAGCAGCTATATTGAATGGTGGAGGCAGTGAGAAGATTAGGGACATAGTATTAAGGAATGTCACTCCATTGTCCTTAGGATTCGAGAAATACGATGGTACAGTTGCCGTGATAGTTCCAAGGAACACTACCATTCCGACAACAATGTCGCAAGGTGGTTTCACTACACCCGAAGATAACATGAGTTCACTTTCGATTAACGTTTATGAGGGCGAGAGAGCAAGAGCTCAGGATAACAACTTTCTAGGAAGATTTGATCTACCCGTTCCCGTAGCACTTCGAGGTGTTGTTCAGATCACAGTTTGCTTTTCCATTGATGAGGATGGAATATTAAAAGTCTCTGCTCAGGAATTACAAACAGGGAACAGAAATGACATTACCATAAGTAATGACAAAACAATACTATCAGAGGAAGAAATTGAGAAGATGGTGAAGGAAGCAGAGGAACACAAGGCTGAGGACGAGGAGTTTAAGGAGATGGCTAAAGGAAGGAATGCTTTGGAGGATTATTTGTACGACGTCAAGCATATTGTCAATGAGATTAATGCTTCAATGATTTCCCAAGTGGACAAGAAGCAGACTAAGGATGCAATTGAGCAGACCATATCATGGCTTACTGCTAACCCACATGCAAAATTTGATGAGTTTGCGAGTAAGATGGAGAAACTTGAGAGCATCTTGGATCCTATCATATTGAAGGTGACGGGGAAGGAATCTAAGAATAAGATTATACTAAAATCGCAGGCACTTCATGCTATACATGCAGATATTTCACTCTTAAGTGGTAATGAAGGTGGGATGGTTTCCTCTTTTGCTTCCCTCTTATCGGATATTGAGAAAATGGTAATTAATTGA 2595 0.427 MDPILENTSENNDETEGVDPIMLEEENSTNTVGNEKHNPTKIAVNDQAEKTSSENNVDIGIDPVNDQAKETSENSADIGIDPVNEHEEAEAETKTSENNVDIGIDLVNNETEKTSENNVDIGFDSHTTDVKEKEHNQSENIVNEQDSEAKTNINDEAEKTSENNVDNGFDSHTDVKDKDHNKSENIAKSNVNDEAEKTSENKKNVAIGIDLGTTYSCVAVWEEEQNHAEIIVNDQGNRTTPSYVAFTDTHRMAGEAAKNKAASNPINTVFDAKRLIGRKFSDAQVQSDMKLWPFKVIAGDDDKPMIVVNYKNEEKKFFPEEISSMVLAKMRDIAETYLDSPVHNAVITVPAFFNDSQRRATKDAGAISGLNVMRIINEPTAAALAYGLHKKDRFTQQRNIVIFDLGGGTFDVSILTIKDTDFKVLATDGDTHLGGEDFDNRMVNHFVEEIKKKYNKDISGNPRALRRLRTACEKAKRILSSTAETYVDVEALYDGEDFFSSMSRAKFDELNIDLFTRCMEIVERCLSDAKMDKSRVDDVVLVGGSSRIPKIQKLLQELFNGKHLCKSINPDEAVAYGAAVQAAILNGGGSEKIRDIVLRNVTPLSLGFEKYDGTVAVIVPRNTTIPTTMSQGGFTTPEDNMSSLSINVYEGERARAQDNNFLGRFDLPVPVALRGVVQITVCFSIDEDGILKVSAQELQTGNRNDITISNDKTILSEEEIEKMVKEAEEHKAEDEEFKEMAKGRNALEDYLYDVKHIVNEINASMISQVDKKQTKDAIEQTISWLTANPHAKFDEFASKMEKLESILDPIILKVTGKESKNKIILKSQALHAIHADISLLSGNEGGMVSSFASLLSDIEKMVIN 864
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0600 864 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 744 819 IPR029048 -
Sto10g0600 864 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 203 822 - -
Sto10g0600 864 Pfam Hsp70 protein 206 811 IPR013126 GO:0005524|GO:0140662
Sto10g0600 864 MobiDBLite consensus disorder prediction 46 98 - -
Sto10g0600 864 Gene3D Actin; Chain A, domain 4 434 517 - -
Sto10g0600 864 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 591 748 IPR029047 -
Sto10g0600 864 MobiDBLite consensus disorder prediction 7 21 - -
Sto10g0600 864 SUPERFAMILY Actin-like ATPase domain 205 390 IPR043129 -
Sto10g0600 864 MobiDBLite consensus disorder prediction 1 21 - -
Sto10g0600 864 PRINTS 70kDa heat shock protein signature 205 218 - -
Sto10g0600 864 PRINTS 70kDa heat shock protein signature 235 247 - -
Sto10g0600 864 PRINTS 70kDa heat shock protein signature 257 265 - -
Sto10g0600 864 PRINTS 70kDa heat shock protein signature 345 365 - -
Sto10g0600 864 PRINTS 70kDa heat shock protein signature 408 418 - -
Sto10g0600 864 PRINTS 70kDa heat shock protein signature 536 552 - -
Sto10g0600 864 PRINTS 70kDa heat shock protein signature 568 588 - -
Sto10g0600 864 PRINTS 70kDa heat shock protein signature 595 614 - -
Sto10g0600 864 PRINTS 70kDa heat shock protein signature 676 692 - -
Sto10g0600 864 MobiDBLite consensus disorder prediction 149 182 - -
Sto10g0600 864 Gene3D - 391 565 - -
Sto10g0600 864 Gene3D - 270 325 - -
Sto10g0600 864 ProSitePatterns Heat shock hsp70 proteins family signature 1. 209 216 IPR018181 -
Sto10g0600 864 ProSitePatterns Heat shock hsp70 proteins family signature 2. 402 415 IPR018181 -
Sto10g0600 864 Gene3D - 744 815 IPR029048 -
Sto10g0600 864 MobiDBLite consensus disorder prediction 113 182 - -
Sto10g0600 864 Gene3D - 207 583 - -
Sto10g0600 864 ProSitePatterns Heat shock hsp70 proteins family signature 3. 539 553 IPR018181 -
Sto10g0600 864 MobiDBLite consensus disorder prediction 80 95 - -
Sto10g0600 864 PANTHER HEAT SHOCK PROTEIN 70KDA 203 822 IPR013126 GO:0005524|GO:0140662
Sto10g0600 864 Coils Coil 715 740 - -
Sto10g0600 864 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 590 743 IPR029047 -
Sto10g0600 864 SUPERFAMILY Actin-like ATPase domain 395 586 IPR043129 -
Sto10g0600 864 MobiDBLite consensus disorder prediction 125 141 - -
Sto10g0600 864 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Sto10g0600 Sto-Chr10 5168963 5173986 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0600 206 814 Calmodulin-binding Proteins AT3G12580 65.466 0.0 830
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0600 K03283 - rcu:8265956 795.808