Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0594 ATGACGAAACAGGAATTTCACAACGGTTGCGATGACATGCTTATCGATAGATGTGAACCAGAAGCTCCTAAGCAAAAACAAGGCGGATCTGTTCCTAATGAGTTCAATTCGCATTATCTTAAAGTGTATTACGGAAGGCTGTTTCCATATGCTGATATTTTTAGATGGATTTCTTACGGCAATGATGGGAAGCATCCGGCTTGTGATTCTTCATATGTGAGCCGCAGGGAATTTTCATTCACACTTGACAACGATATATATCTGCGCTTCCTATCTTTCAACAGTGCAGCAGAACTTGAAAACAAAATCAAAGAGAAGTGTCCATTTAAGATTGATATTGGACCTGTGTATAGTGTGGATCCTACAAAAAGGCACGCCTATGCTCAGAGTGGTGATAATGTTTTCACTCCAGTTGAGAGGGAGCTAATTTTTGATATAGATATATCAGATTATGATGACGCTAGATACTGCTGCTCTGGTGCTGATGTTTGCTTGAATTGCTGGCCATTGATGACTATAGCTATCAAAGTGATTGATTTTGCCTTAAGGGATGATTTTGGCTTTAAGCACATTCTGTGGGTCTATAGTGGCCGACGTGGTGTTCATTGTTGGGTCTGTGATGGGAAGGCAAGAAGATTGACTAATGAGCAGAGAGCTGCTATTGCTGACTATTTTCGTGTCTACAAGggaaatgaaaataattctAAAAAGGTTTCTCTGACGGGCCATGCTCTTCATCCTTTCCTGGCAACAGCTTACACTAAAGTTCTTAAagatttttttgagaaaaaactTTTAATAAGTCAAAGTTTACTTTCTACTGAAGAGAGATATGAGAAGATCCTAGAGATGATTCCTGATGCAGCTATTACTTCTGAACTTAGGGGCAGGTGGCAAGAAAATAGGCGGTCTTCTAGTGTGAAAGAAGACATTAATGTTGTTCGATGGGAACAGCTCAAACAGTTGCTGCAATCAGGAAAGCATAAGGCACAAGGACTGCGAAGGTGTGTTGAAGAGATTGTGTTCTGTTTTGCTTACCCTAGGCTAGACATGGAGGTTTCAAAGCATATGAATCATTTGCTTAAAGCGCCATTCTGTGTACACCCAAAAACAGGCCGTGTTTGTGTCCCTATTGATCCAAATCAATGTGAGCAGTTTGATCCTACCACAGTACCGACCCTTTCACAGCTTTTAGATGAGCTTAACGAAAGAGGTTTGAGAGATGATGTTGATGGTGAATGGAAGGGAACTTCATTTGGAAATGCTGTTAGCCTTTTCAGATCGTCATTCTTACAGCCTCTACTAAAAGCCAGCAAGGTGAAAGAAAGCACACATGTACACCTGACCTGA 1350 0.4015 MTKQEFHNGCDDMLIDRCEPEAPKQKQGGSVPNEFNSHYLKVYYGRLFPYADIFRWISYGNDGKHPACDSSYVSRREFSFTLDNDIYLRFLSFNSAAELENKIKEKCPFKIDIGPVYSVDPTKRHAYAQSGDNVFTPVERELIFDIDISDYDDARYCCSGADVCLNCWPLMTIAIKVIDFALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKGNENNSKKVSLTGHALHPFLATAYTKVLKDFFEKKLLISQSLLSTEERYEKILEMIPDAAITSELRGRWQENRRSSSVKEDINVVRWEQLKQLLQSGKHKAQGLRRCVEEIVFCFAYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNQCEQFDPTTVPTLSQLLDELNERGLRDDVDGEWKGTSFGNAVSLFRSSFLQPLLKASKVKESTHVHLT 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0594 449 PANTHER DNA PRIMASE 46 440 - -
Sto10g0594 449 SUPERFAMILY Prim-pol domain 37 403 - -
Sto10g0594 449 PANTHER DNA PRIMASE SMALL SUBUNIT 46 440 IPR014052 GO:0003896|GO:0006269
Sto10g0594 449 CDD AE_Prim_S 49 388 IPR014052 GO:0003896|GO:0006269
Sto10g0594 449 Gene3D DNA primase, PRIM domain 28 440 - -
Sto10g0594 449 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 41 400 IPR014052 GO:0003896|GO:0006269
Sto10g0594 449 Pfam DNA primase small subunit 144 379 IPR002755 GO:0003896|GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0594 Sto-Chr10 5069308 5074757 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0594 1 439 Core DNA Replication Machinery Family AT5G41880 65.227 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0594 K02684 - vvi:100260326 733.021