Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0581 atgtcttcttcttcttcttcttgtggaTCAGGTAATTCGTCATGGAGTGCCAAGGAAAACAAAGCCTTTGAGATGGCTCTTGCTGTGTATGACAAGGAAACACCAGAACGTTGGTTGAATATAGCACAAGCTGTTGGTGGTTCTAAAACTGTTGAACAAGTGAGGATGCACTATCAACTCCTTCTTCAAGATCTCAACCGTATTGAGTCCGGCCAAGTCCCTTTATTTCCTCCTTACAAGTAG 243 0.3868 MSSSSSSCGSGNSSWSAKENKAFEMALAVYDKETPERWLNIAQAVGGSKTVEQVRMHYQLLLQDLNRIESGQVPLFPPYK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0581 80 ProSiteProfiles Myb-like domain profile. 13 62 IPR001005 -
Sto10g0581 80 Pfam Myb-like DNA-binding domain 13 62 IPR001005 -
Sto10g0581 80 CDD SANT 19 62 IPR001005 -
Sto10g0581 80 Gene3D - 6 75 - -
Sto10g0581 80 SUPERFAMILY Homeodomain-like 13 70 IPR009057 -
Sto10g0581 80 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 5 80 - -
Sto10g0581 80 SMART sant 11 64 IPR001005 -
Sto10g0581 80 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 5 80 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0581 Sto-Chr10 4915036 4915278 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sto10g0581 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0581 - - vra:106761815 105.145