Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0570 ATGATTATCTTTGGGATATTGCTTTCGCATTCGAGGTGGAAATCAGGAAGACCACAATACTCTGCTCTGTTTTCTCCCCAGAATGGATACTTGAGGTTTGAGATATTTCCACAGCTAAAAGCGTTAACGCAGTTCTCGAACCGATCATCTTCCACGCCGAGAGATGTTGGAATATTGATTGAGATGAAGAAAATGACCAAAAGAATAGACATGGAAGATGGGATAAGAGGAGAAGATTATCAATTTACAAACTGCAGTGAAGGTTTCAGATGTGGAAACTTTATCTCAAACCTCAAGTATCCATTCTGGGGAGGAAACAGAGCAGAGTATTGTGGTCTTCCTGATTTCGAACTCATATGTGAAGAGAATATTAACCCAGTCTTAATCATTCACTCCATCCCATATCGCATTCTAGATTTCGACTCGACTTCACAGAGTCTTAGAATGGCTAGGGATGATTTCAACTCTCTCTGCCCCATTATTTACAAAAACAACACCTTTGATCCCACAACCTTTAACTATGATaatgatgttcttgttaatttGACCTTTCTCTACAATTGCTCTACTAATTTATCTCTACCATATCAGTCCTTTAGGATAATGTGCTCTGAAGCTGGTGATACTGATACATTTAAATATGCCTACTATGCTTTGCAAACCCAATCAGTAGTGAATACTGTAAGTAATTGCAACAGTATTATTATACCCATATTCAAGTCCCGAGCTTCAGATTCTATGTTCCAGGATACCATTGAAGAGGCATTAAATGAAGGTTTTGGGGTGAAATTGAGGGTCAAGAATGAGGAGTGCAACACATGTGGTAGATCTGGTGGAGAGTGTGGCTATAATAAGACTGAGGGACACTTCTCTTGTTTTTGCAAGGATGGACCTCATACATATTCGTGTTCACAAGAGTCTAcagGTCAAGGAGGATATGGCGTTGTATACAAAGCGAGCTTACCTGATGCTCGTCTTGCAGCAGTAAAAGTGCTAAGTGAATCTAAAGGAAGCCATGAAGAATTTATAAATGAAGTTTGGAAGGCATTGTTCCAAATCGTTATTGGAATTGCTCGGGGGCTAGAATACTTGCATCAAGGTTGTAATACCAGAATTCTGCATTTTGATATTAAACCCCAAAATATTCTTTTGGATGAAGATTTTTGTCCAAAAATCTCAGATTTTGGATTATCTAAGATATGTAAAAAGAAGGAGAGTATTGTGTCAATAATGGGAACAAGAGGAACTGCAGGATTCATTGCACCAGAAGTATTTAGTAGAGTATTTGGTAGAGTTTCTCATAAATCTGATGTTTTTAGCTATGGCATGTTGGTCCTTGAAATGGTTGGAGGAAGGAAGAATTATGATAGTGGAGGGTCACATACTGATGAAATGTATTTTTCAGAATGGATTTATAAAGATCTTGAGGAGGGTAATATTCTTGGGGGTTCCATGTCAATCACAAAGGAAGAAAATGAGGTGATAAGAAAGATGACTCTAGTAAGTCTATGGTGTATTCAAACAAATCCATCAAATAGACCAGCAATGAGTAAAGTAGTAGAGATGTTAGAAGGGTCTGTCTTGTCCCTACAAATTCCACCAAAGCCTTCCTTGCATTCTCCTACTCTGGCCCCATTACATTTGTCAAATGGATCTTCCAATGATATGGTTGAGACTAATTCAATAAGCACTAAAAGGATGCTTTAA 1707 0.3773 MIIFGILLSHSRWKSGRPQYSALFSPQNGYLRFEIFPQLKALTQFSNRSSSTPRDVGILIEMKKMTKRIDMEDGIRGEDYQFTNCSEGFRCGNFISNLKYPFWGGNRAEYCGLPDFELICEENINPVLIIHSIPYRILDFDSTSQSLRMARDDFNSLCPIIYKNNTFDPTTFNYDNDVLVNLTFLYNCSTNLSLPYQSFRIMCSEAGDTDTFKYAYYALQTQSVVNTVSNCNSIIIPIFKSRASDSMFQDTIEEALNEGFGVKLRVKNEECNTCGRSGGECGYNKTEGHFSCFCKDGPHTYSCSQESTGQGGYGVVYKASLPDARLAAVKVLSESKGSHEEFINEVWKALFQIVIGIARGLEYLHQGCNTRILHFDIKPQNILLDEDFCPKISDFGLSKICKKKESIVSIMGTRGTAGFIAPEVFSRVFGRVSHKSDVFSYGMLVLEMVGGRKNYDSGGSHTDEMYFSEWIYKDLEEGNILGGSMSITKEENEVIRKMTLVSLWCIQTNPSNRPAMSKVVEMLEGSVLSLQIPPKPSLHSPTLAPLHLSNGSSNDMVETNSISTKRML 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0570 568 ProSiteProfiles Protein kinase domain profile. 201 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0570 568 Pfam Protein kinase domain 352 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0570 568 MobiDBLite consensus disorder prediction 543 568 - -
Sto10g0570 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 372 384 IPR008271 GO:0004672|GO:0006468
Sto10g0570 568 PANTHER - 79 307 - -
Sto10g0570 568 PANTHER - 307 346 - -
Sto10g0570 568 PANTHER - 347 558 - -
Sto10g0570 568 PANTHER RUST RESISTANCE KINASE LR10-RELATED 307 346 IPR045874 GO:0004672
Sto10g0570 568 PANTHER RUST RESISTANCE KINASE LR10-RELATED 79 307 IPR045874 GO:0004672
Sto10g0570 568 PANTHER RUST RESISTANCE KINASE LR10-RELATED 347 558 IPR045874 GO:0004672
Sto10g0570 568 Gene3D Transferase(Phosphotransferase) domain 1 349 532 - -
Sto10g0570 568 SMART serkin_6 302 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sto10g0570 568 MobiDBLite consensus disorder prediction 541 568 - -
Sto10g0570 568 SUPERFAMILY Protein kinase-like (PK-like) 309 524 IPR011009 -
Sto10g0570 568 Pfam Wall-associated receptor kinase galacturonan-binding 85 150 IPR025287 GO:0030247
Sto10g0570 568 Pfam Wall-associated receptor kinase C-terminal 207 297 IPR032872 -
Sto10g0570 568 Gene3D Phosphorylase Kinase; domain 1 300 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0570 Sto-Chr10 4783572 4790307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0570 85 546 Receptor kinase-like Gene Family AT1G66930 39.318 6.54e-108 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sto10g0570 Pkinase 2.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0570 - - adu:107486803 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0570 10 4783572 4790307 Sto10g0570 10 4783572 4790307 ECH