Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0557 ATGAATGATGCTTCTGGGAAGACGACGTCTTCTTCGTGTTTGGCAATCACCGAGAAGAAGAACCAAGGACTCGGTGGTTGTACTGGTCTTTTCTTTCAGCTCTTTGATTGGAATGGGAAGCTTGCAAAGAAGAAGCTTTTCTCCAAGAAACTTCTGCCTAATGCTCGTCCAAAACAAGCTAAAAAGTTTAAAGGAGATGAAAAAATGCCCAGTTCTAAGCTTCACTTGATTGCTAATGAAAATAAGGGAGGCTTCCCAAGTTCTAAAAAAGGTGGGAATCGTGGTTTAGGTGTGGAACAAAAGCATGAAATGCGAGCTCCAGGTCTTATAGCTAGGTTGATGGGTCTAGAATCCATTCCAGCTTCTCAGCGAGATAAGTCCAACAAAAAAGCTTCGTTTTCTGCTACTTGTAATAGGAAGGACGAATCCCCAGGTAATCATTGCGAGCCAGATGGACCAGTTGAGAATTTGGAAATGAGAATTGCAAGGCATGATTCAAGACCTCAAAAGCTTCAGAAAACTGGGGCATATGAGAGAAAGACAGTGGCTAGGTTCGGAGCTGAAGCCCTGCAAATTAAGAGTGTTTTCTCACGAGCAAAAAAGTATAATAGTATCTATCATCACCCCCCAAAGATTGCTTCTCATTTGAAGAGTCCTAGAATTACTTCTGGAAAGAATATGTCTCGAAGTTCAAGGTTAATAGGAGCAGCAACTAAGATTTTGGAACCTGGCCTGCAAGCTACAAGCAGAGCAAAATGCTCTCTTACATATTCGAGCTCCATGTATCCTTCTAAGAATAACGCTGCGACAGATCAAGTAGGAACACTGTCAGCTAATCTACAAAATCAATCTGGGTACGATGCCAATGCAGCCAAGCCTTTGATGGGATCAATGGGACAGACTTCTTGCAAAAGTTGTGGTAATTTGCTTGATGTGGTTGACTGCAATATGGATGCTGAGGGGCAGCCAACTGTTCATCCACCTATCATTTCAGAAGTGATCAGTACCTCCCCGTCAGCACAGAGGAAGGTTAGGTCACTCATGAACTTCCATGGACAAGAAAGAGATGTGGTTCTTCTGAGACCTCAACGACAACTTGCATCTACTGTTGAAGAAGATGGAAGAAATTATACAGTGTCTTGTCACGAACCCACTACCAGAAAAATGCCTTTGCCCGGTGAGTGTCCTTCTCAATGGACTTCATTGCACCAATGTTGCAGAACCGTAGAAGATGATGCATCCTCTGTTGCCTTCAAGTGCAAAGCACAAACAGAAGAACAGATTTTAAGCAGTGAAAGAACTTCTCCTGGATCTAAAGTAAGTAGGTCCAAAAACTTTGTTGCTTTGAATAGAAGCCAAAGTGGTCAAACCAGGTTGAGGTCACCTACCAAAATGGACACTTCTAAGTTTGATCTGGAGAGGAAACCTTGTCGTAGGCAGGATGATTCCTTGACTCATGTAAGGACAATGGAACGGAAAAGAAGGATCCCAAGTGTGACACAAGTTGAAAGTACAGCTTCTGTTAATTCTGCTATTTTGAGGCAGAGAAATTCTCGTTCTGATGCACAAAGTGGGAAAGGGAAGGATATTAGTGCTTACTCCATTAACAGTACTAATAATAAATGTAAACAAGGGAGTCGAGgaaaaacatattatttaaatGACAACAAGGTCAACGGTGTAGTTTCATTTGCATTTAATTCCCCTTTGAAGCAAAGGACAGGAATCACCGCTGAAAAGGAAGAGATAAGTGGCCCTAGTGAGATGAATCCATATTTCCAGACACCTGTACACATGGGAGAAGAAGCTTTAGGTGCCTTTCTAGAACAGAAATTAAGGGAATTGACCTCTCAAGGGGATGAGAAGTTGGCTATTGGTTCTCGGCCTAAAAGGTCACCTGCCATGATTCTTCAGGAGCTGATATCTGCTCTAAGTGCAGCAAATCTGACATGTCATGATGATCACAGAGTCAATGCAGATGAAGGTTTCCATGATGTGAGAGAAAAGGGAAGGCTAGTAGGAGCCTCTTGCAATAGTGATCGTCTTAGTCCTGGATCTGTTCTGggagcttctttttcttccaGTAGTCTTGATGAAAGCTCAGGGCATGATCTTCAACCTGAGTCCATGAACTACTCATATGATCAGTTGGAACATGATGCTGAGCTTTTAGATTCTGTAACATCATTGAACAAAAGGAAGATAGTTACTAAGGTGTTGCCTGAGATTGTCAACCAAATTTCTAGGATATTACAGAGCTTAAGTTCATTTGGGGCAAGATTGACAAGAAGCAAGCTCACCCATGTGAAAGATGTTATTCTGAATGCCGAGTTATTGCTTGGAAGTACCGCCACCATGCACAGTGAAGTTGGAGTGTCACATCTTTTCATCTCTCGCTTTCTCCTCTATGAACTGGACGCAATGTTGGTCGATGCCATGTTAACAGATTTTACTGGCTTTGTGGGTTGCAAAGATTCTAAGGAGAGAAACCAACTCAAGAGATTTCTCTTTGACTGTGTTATAGAATACCTAGAATCAAATTGCTGCAAATATTGTAACTGTGGATTCAGGACATGGACAAGGCTACCTTTATGCATGAACTCTGGCATGGTGGTTCAAGAGGTGAAGAGGGTGATTAAGAAGTGGGCAAGTATTGCTGGGATGATACCTGATGAGATGATAGAATGGGAGATGAGCCATTCTGGAGAGACATGGATAGATTTTGAAATCGAAGCATTCGAGGCTGGTGTTGCAATAAATGAGGAGATACTTCAAATATTGGTTCATGAAATTGTTGAAGAACTTGAAGATTGCATAGGGGCATCATTTGAATCTATACCTAGATCTTCCTACTAG 2856 0.416 MNDASGKTTSSSCLAITEKKNQGLGGCTGLFFQLFDWNGKLAKKKLFSKKLLPNARPKQAKKFKGDEKMPSSKLHLIANENKGGFPSSKKGGNRGLGVEQKHEMRAPGLIARLMGLESIPASQRDKSNKKASFSATCNRKDESPGNHCEPDGPVENLEMRIARHDSRPQKLQKTGAYERKTVARFGAEALQIKSVFSRAKKYNSIYHHPPKIASHLKSPRITSGKNMSRSSRLIGAATKILEPGLQATSRAKCSLTYSSSMYPSKNNAATDQVGTLSANLQNQSGYDANAAKPLMGSMGQTSCKSCGNLLDVVDCNMDAEGQPTVHPPIISEVISTSPSAQRKVRSLMNFHGQERDVVLLRPQRQLASTVEEDGRNYTVSCHEPTTRKMPLPGECPSQWTSLHQCCRTVEDDASSVAFKCKAQTEEQILSSERTSPGSKVSRSKNFVALNRSQSGQTRLRSPTKMDTSKFDLERKPCRRQDDSLTHVRTMERKRRIPSVTQVESTASVNSAILRQRNSRSDAQSGKGKDISAYSINSTNNKCKQGSRGKTYYLNDNKVNGVVSFAFNSPLKQRTGITAEKEEISGPSEMNPYFQTPVHMGEEALGAFLEQKLRELTSQGDEKLAIGSRPKRSPAMILQELISALSAANLTCHDDHRVNADEGFHDVREKGRLVGASCNSDRLSPGSVLGASFSSSSLDESSGHDLQPESMNYSYDQLEHDAELLDSVTSLNKRKIVTKVLPEIVNQISRILQSLSSFGARLTRSKLTHVKDVILNAELLLGSTATMHSEVGVSHLFISRFLLYELDAMLVDAMLTDFTGFVGCKDSKERNQLKRFLFDCVIEYLESNCCKYCNCGFRTWTRLPLCMNSGMVVQEVKRVIKKWASIAGMIPDEMIEWEMSHSGETWIDFEIEAFEAGVAINEEILQILVHEIVEELEDCIGASFESIPRSSY 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0557 951 Pfam Domain of unknown function (DUF4378) 766 930 IPR025486 -
Sto10g0557 951 MobiDBLite consensus disorder prediction 121 141 - -
Sto10g0557 951 MobiDBLite consensus disorder prediction 120 153 - -
Sto10g0557 951 Pfam DUF761-associated sequence motif 99 125 IPR032795 -
Sto10g0557 951 MobiDBLite consensus disorder prediction 451 470 - -
Sto10g0557 951 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 13 935 - -
Sto10g0557 951 MobiDBLite consensus disorder prediction 496 532 - -
Sto10g0557 951 MobiDBLite consensus disorder prediction 499 532 - -
Sto10g0557 951 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 13 935 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0557 Sto-Chr10 4715805 4720555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0557 9 935 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 29.576 4.46e-83 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0557 - - aprc:113861902 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0557 10 4715805 4720555 Sto10g0557 10 4715805 4720555 ECH