Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0546 ATGGAAATGGGAATGGCAGCCATGGAAGACATAGACATAGCCCAAGACATAACCCCACCCATttcccctctctctttctctctctacgaTTCCCTTCTCCATTCTCACTGCTCTTCTTGCTTCTCTCCCCTCCCTCCCTTTCCCCATAATTCCCACTCTATCCCCACTCCCCTCTACTGTTCGCCTCTCTGCTCTGCCTCCCATTCCCCCCTCCACTTCTCCAGCGCCGagcacctcctcctcctccaatcGCCCCACTCCGACACCTCCGACCTACGCGCCGCCCTCCGCTTCCTCCAATCCCACCGCGCCTCTTCTGTTCACTCGGGTCGGGTCGCCCGATTACTCGTTAACCGCGAGAAATTGACGAGTCCAGAGGgcccagatgatgatgacgatgagCTTTGCGAGAGAATTAGGGTCGGCGCTAGAGCCATGGCGGCTGCGATTAAAACGCAGCGTGGTGGAGAGGACTCGGACGACGTCGTATTGGAGGAAGCGACGGTTGCGTTGTGCTTGGTGCTAACGAACGccgtggaggtgcaggataacAGTGGGCGCAGTCTAGGGATTGCGGTGTATGATTCGAGCTTCTGCTATATCAATCACAGTTGTTCCCCCAATGCGTGCTATCGCTTCGTTTTGTCTCCGCCTAATAGTCCACCTGTGGCTTCTCGTGGGAAGCCGAAGCTTCGTATAACTCCGTTCATCCGCCATTTACAAGATAGACAAATAGATAGTGGTAATGAAATTGAGAGTTGTAGCGGTAATGAATTAGCAAAAGAAGAGAAGCAGGGCTATGGTCCAAAAATCATTGTGCGGAGTATCAAGAGAATAATGAAGGGAGAGGAGGTCTTTGTTACATACACTGACCTCTTGCAGCCTAAGGCAACGCGGCAATTGGAGCTACGGTCAAAATATCGGTTTATCTGTTGTTGTGAAAGATGTAGTACATTGCCCTTCACATACGTGGATCATGCATTGCAAGCAATTTCTGCTGTCAATCTTGATTCTTCTGGTTTGAGTTCCTGTAGCCTTGTGTCTAGAGACAAGGCAGTTAGACTGACAGAGTACATTGATGAAGTTATATCCGAGTACCTTTCAGACTCAGCCGGCGATCCCGAGTCTTGTTGCAAGAAGCTCGAGTACATCCTCGGACAAGGCTTAaaggaagatgaagaacaaTCACAATCCAGCTTCAAGCTGCATCCCCTGCACCACCTTTCTCTAAATGCCTACACAACACTGGCTTCAGCATATAAAGTTCGTGCTACTTCTCTGTTTTCTGATGTTGATGAAAATCAATCTGAAGCTTTTGACATGAGCCGAACCAGCACAGCATATTCCTTGTTACTTGCAAATGCAACTCATCACCTCTTCCGTTCCGAATCTTCGCTGATTGCATCGGTTGCGAATTTTTGGATGGATGCTGGCGAGTCTCTGTTATGTCTCTCCAGAATGGGTATGGTTGTTTCGAACCTACCTTCTCTTAGTAAGTTTGAATGCTCAAATTGTTCATTAGTGAACAGATTTAGAGTATGTGCTTCAAATGTTCAAATTAAAAGTGCAGATTATGAAATTGTGTCAAataATATCCATTTTAACAGTAATGACATGGGTTCCTCTGACGAATCTGGGGGTAGTATTGGTATTGTGACTGAACATGGAGGAGAACATATCTTTCAGCTTGGTGTGCACTGCTTAGCATATGGAGGAGAACTCATAAGGAAAGATGTATCAGCACCTGTCATAGGCATTGGGATAAGTGAATATGAAGCAAAATCCTGA 1788 0.4424 MEMGMAAMEDIDIAQDITPPISPLSFSLYDSLLHSHCSSCFSPLPPFPHNSHSIPTPLYCSPLCSASHSPLHFSSAEHLLLLQSPHSDTSDLRAALRFLQSHRASSVHSGRVARLLVNREKLTSPEGPDDDDDELCERIRVGARAMAAAIKTQRGGEDSDDVVLEEATVALCLVLTNAVEVQDNSGRSLGIAVYDSSFCYINHSCSPNACYRFVLSPPNSPPVASRGKPKLRITPFIRHLQDRQIDSGNEIESCSGNELAKEEKQGYGPKIIVRSIKRIMKGEEVFVTYTDLLQPKATRQLELRSKYRFICCCERCSTLPFTYVDHALQAISAVNLDSSGLSSCSLVSRDKAVRLTEYIDEVISEYLSDSAGDPESCCKKLEYILGQGLKEDEEQSQSSFKLHPLHHLSLNAYTTLASAYKVRATSLFSDVDENQSEAFDMSRTSTAYSLLLANATHHLFRSESSLIASVANFWMDAGESLLCLSRMGMVVSNLPSLSKFECSNCSLVNRFRVCASNVQIKSADYEIVSNNIHFNSNDMGSSDESGGSIGIVTEHGGEHIFQLGVHCLAYGGELIRKDVSAPVIGIGISEYEAKS 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0546 595 SUPERFAMILY SET domain 160 314 IPR046341 -
Sto10g0546 595 Pfam SET domain 199 289 IPR001214 GO:0005515
Sto10g0546 595 Gene3D SET domain 156 289 IPR046341 -
Sto10g0546 595 PANTHER PROTEIN SET DOMAIN GROUP 41 3 533 - -
Sto10g0546 595 CDD SET_SMYD 161 316 - -
Sto10g0546 595 Gene3D Tetratricopeptide repeat domain 291 461 IPR011990 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sto10g0546 SET 8.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0546 - - aprc:113867790 560.066