Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0544 ATGGTGGTAAAACCAACAAAGGCCCAGAAGAAGATTGCTTATGATGCTAAGCTATGCCAACTTCTGGAGGATTACACACAAATCTTGATCGTGGCAGCTGACAATGTTGGATCCAACCAACTCCAGAGCATCCGAAAGGGTCTGCGTGGTGACTCAATTGTGCTTATGGGCAAGAACACCATGATGAAACGTACTGTTAGGATGCATTCTGAGAAGACTGGCAACCAGACCTTCCTTAGTCTTATTCCCCTTCTTGTTGGCAATGTGGGGCTTATTTTCACAAAAGGTGATTTGAAGGAGGTTAGCGAAGAGGTTGCCAAGTACAAGGTAGGAGCTCCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTCGTAGTTCCTCCTGGCAATACAGGGCTTGACCCATCTCAGACCTCTTTCTTCCAGGTTCTTAACATCCCTACCAAGATTAACAAGGGTACAGTGGAAATTATCACCCCTGTGGAACTCATCAAGAAGGGAGACAAGGTGGGATCTTCTGAAGCTGCTTTGCTCTCTAAGCTTGGAATAAGGCCCTTCTCATATGGTCTTGTTGTCCTGTCTGTGTATGACAATGGCTCAGTGTTTAGCCCTGAAGTGCTTGATCTGACTGAGGATGACCTTGTTGAGAAATTTGCAGCTGGTGTCTCCACCTTGACTTCATTTGCACTTTCCATCTCATACCCTGCCCTTTCAGCTACACCACACATGTTCGTCAATGCCTATAAGAATGTTCTGAGTGCTGAGAAGACCAAGGAGTATCTCAAGGATCCTAGTAAATTTGCTGTTGCGGCCGTCGCTGCACCTGCTGGTTCCGGTGCTGCCGCAGTCGCCGCCCCTGCCAAGGAGGAGGAAAAGAAGGAAGAGCCTGCAGAAGAGTCCGATGATGATATGGGCTTTAGCTTATTTGATTAA 933 0.4727 MVVKPTKAQKKIAYDAKLCQLLEDYTQILIVAADNVGSNQLQSIRKGLRGDSIVLMGKNTMMKRTVRMHSEKTGNQTFLSLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVEKFAAGVSTLTSFALSISYPALSATPHMFVNAYKNVLSAEKTKEYLKDPSKFAVAAVAAPAGSGAAAVAAPAKEEEKKEEPAEESDDDMGFSLFD 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0544 310 PIRSF L10E 2 310 IPR030670 GO:0042254
Sto10g0544 310 Gene3D - 6 209 IPR043141 -
Sto10g0544 310 MobiDBLite consensus disorder prediction 295 310 - -
Sto10g0544 310 Pfam 60s Acidic ribosomal protein 246 309 - -
Sto10g0544 310 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 310 - -
Sto10g0544 310 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Sto10g0544 310 CDD Ribosomal_P0_L10e 9 185 - -
Sto10g0544 310 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 310 - -
Sto10g0544 310 MobiDBLite consensus disorder prediction 281 310 - -
Sto10g0544 310 Pfam Ribosomal protein L10 7 108 IPR001790 -
Sto10g0544 310 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Sto10g0544 310 Gene3D - 114 185 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0544 Sto-Chr10 4540682 4543030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0544 1 309 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 77.812 3.01e-172 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0544 K02941 - thj:104810080 497.278