Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0533 ATGGTCGCTGCCAAGAAAACCAAGAAGACTCATGAGAGTATCAACAATAGGCTCGCTCTTGTGATGAAGAGCGGAAAATATACCTTGGGTTATAAAACGGTTTTGAAATCCCTAAGGAGCTCTAAAGGGAAATTGATTATTATTGCCAACAACTGCCCACCTTTGAGGAAGTCAGAAATAGAATACTATGCTATGTTGGCGAAAgtttttatcAAACATTTATTAACAAAGTGTTCCTTGCTGAACATAGACAACGTTGATTTGGGCACTGCATGCGGAAAATATTTTAGAGTGTGCTGCCTCAGCATTGTTGATCCTGGTGATTCGGACATCATTAAGACAATGCCTGGCGATCAGTAG 360 0.3972 MVAAKKTKKTHESINNRLALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVFIKHLLTKCSLLNIDNVDLGTACGKYFRVCCLSIVDPGDSDIIKTMPGDQ 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0533 119 SUPERFAMILY L30e-like 13 114 IPR029064 -
Sto10g0533 119 Gene3D - 2 115 IPR029064 -
Sto10g0533 119 PANTHER RIBOSOMAL PROTEIN L30 1 119 IPR039109 GO:0003723
Sto10g0533 119 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 13 112 IPR004038 -
Sto10g0533 119 ProSitePatterns Ribosomal protein L30e signature 1. 24 48 IPR022991 -
Sto10g0533 119 PANTHER 60S RIBOSOMAL PROTEIN L30 1 119 - -
Sto10g0533 119 ProSitePatterns Ribosomal protein L30e signature 2. 87 107 IPR022991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0533 Sto-Chr10 4461269 4463582 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0533 1 119 Cytoplasmic Ribosomal Protein Gene Family AT1G36240 79.832 3.83e-66 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0533 K02908 - ming:122068994 202.986