Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0525 CTGCTTCCTCTCACCTTCATACCCAATCCCCCTCCCTTGATTCCCCAGCCTCTCACCAATCATCTCCACCCGGAGTACGCTGGGCTAGTGGGCGCGAAGCAGGATAACATTCCtcctcaccaccaccaccactattATCATGGAGGAGCAACGACCaatagcaataataataataataataatatttgtagtaataataataataataataatttgattgtGTCCTCTAATTACAAAAAGGCTAATTCTTCTTGTGCTGCAGCGACGTCGTCTAAGAAAGATAGGCACAGCAAGATTTACACATCTCAGGGCTTGAGAGATCGACGGGTGAGATTGTCCATTGACATTGCTAGAAAGTTCTTCGATCTACAAGACATGCTAGGGTTTGACAAGGCCAGCACCACTCTTGACTGGCTCTTCACCAAGTCCCGGAAGGCGATCCAAGAGCTCGAGCTGGCCTCCCACGGCGGCGGGGGGACCGGGAACAATGGCTCGGCCTCGGTAGATCAGGATTTCATGGTGCTTCAACCTAATTCTCTTCTCCATCATGATAGTGAATTAccaactactactactactaatgATGATTACTGCTCAATATTCCCTAATTTGTCTTCTCCAAATTGGGATACTAATGCTTCCATTCATGAACGATCCAACATTTGTGCTATAGCTAGCATGAACTTGTCCAcaggtatAGCTTCAAATCTTTGGGAAGACTTGGGAGGAATGCAACAATCATCATCAGCGTCTACACTAAATAATGTGTATGGATCTCTAGCTACTACTGCTTGA 795 0.4088 LLPLTFIPNPPPLIPQPLTNHLHPEYAGLVGAKQDNIPPHHHHHYYHGGATTNSNNNNNNNICSNNNNNNNLIVSSNYKKANSSCAAATSSKKDRHSKIYTSQGLRDRRVRLSIDIARKFFDLQDMLGFDKASTTLDWLFTKSRKAIQELELASHGGGGTGNNGSASVDQDFMVLQPNSLLHHDSELPTTTTTNDDYCSIFPNLSSPNWDTNASIHERSNICAIASMNLSTGIASNLWEDLGGMQQSSSASTLNNVYGSLATTA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0525 264 Pfam TCP family transcription factor 91 158 IPR017887 -
Sto10g0525 264 PANTHER TRANSCRIPTION FACTOR TCP1 37 154 - -
Sto10g0525 264 ProSiteProfiles TCP domain profile. 92 150 IPR017887 -
Sto10g0525 264 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 37 154 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0525 Sto-Chr10 4366607 4367835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0525 70 150 TCP Transcription Factor Family AT1G67260 64.198 2.81e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sto10g0525 TCP 1.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0525 - - gsj:114424268 114.775